RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MMD2Q8IY49 270 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 H1FOOQ8IZA3 346 aaPredicted RBP8.15□□□□□ -1.1
CAPN3-202ENST00000337571 Q8N1Y9 231 aa8.15□□□□□ -1.1
CAPN3-202ENST00000337571 MRPS7Q9Y2R9 242 aaKnown RBP8.15□□□□□ -1.1
CAPN3-202ENST00000337571 DPPA5A6NC42 116 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 A8MZ25 164 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 AIREO43918 545 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 FCGR3BO75015 233 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 SCGNO76038 276 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 IFNA6P05013 189 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 SMIM18P0DKX4 95 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 RHOGP84095 191 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 CDK10Q15131 360 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 HACD4Q5VWC8 232 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 IDO2Q6ZQW0 420 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 SLC25A42Q86VD7 318 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 Q8N402 240 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 ZNF645Q8N7E2 425 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 ADAD2Q8NCV1 583 aaKnown RBP8.14□□□□□ -1.11
CAPN3-202ENST00000337571 SRSF12Q8WXF0 261 aaKnown RBP8.14□□□□□ -1.11
CAPN3-202ENST00000337571 DDB2Q92466 427 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 TM2D3Q9BRN9 247 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 DCSTAMPQ9H295 470 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 OR2W1Q9Y3N9 320 aa8.14□□□□□ -1.11
CAPN3-202ENST00000337571 LINC00473A8K010 186 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 MRPS14O60783 128 aaKnown RBP8.13□□□□□ -1.11
CAPN3-202ENST00000337571 OR2A4O95047 310 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 NFYAP23511 347 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-202ENST00000337571 GNG2P59768 71 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 DYRK1AQ13627 763 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 FAM209BQ5JX69 171 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 IL34Q6ZMJ4 242 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 TPRA1Q86W33 373 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 NECAP1Q8NC96 275 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 VSTM2AQ8TAG5 236 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 ISOC1Q96CN7 298 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 C5orf30Q96GV9 206 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 OR51E2Q9H255 320 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 ZNF430Q9H8G1 570 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-202ENST00000337571 C19orf73Q9NVV2 129 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
CAPN3-202ENST00000337571 IGKV1D-8A0A087WSZ0 117 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 NOTOA8MTQ0 251 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 TRBV12-3P01733 135 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 HLA-DQB1P01920 261 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 PRH1P02810 166 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 CSN3P07498 182 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 PSMB9P28065 219 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 FGF9P31371 208 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 GABARAPL2P60520 117 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 DEFA5Q01523 94 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 EXOSC2Q13868 293 aaKnown RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 OR2B11Q5JQS5 317 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 CNIH2Q6PI25 160 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 TTC9CQ8N5M4 171 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 OR4S2Q8NH73 311 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 DYNLRB2Q8TF09 96 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 HSD17B10Q99714 261 aaKnown RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 AIFM2Q9BRQ8 373 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 AKIP1Q9NQ31 210 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 TXNL4BQ9NX01 149 aaKnown RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 DAPK2Q9UIK4 370 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 ELF5Q9UKW6 265 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 SSR3Q9UNL2 185 aa8.12□□□□□ -1.11
CAPN3-202ENST00000337571 RBMX2Q9Y388 322 aaKnown RBP8.12□□□□□ -1.11
CAPN3-202ENST00000337571 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.11□□□□□ -1.11
CAPN3-202ENST00000337571 DHFRP00374 187 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 HRASP01112 189 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-202ENST00000337571 MAS1LP35410 378 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 HAGHQ16775 308 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 MRGPRG-AS1Q2M3A8 158 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 TCTEX1D2Q8WW35 142 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 FCGR1BQ92637 280 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 FYTTD1Q96QD9 318 aaKnown RBP8.11□□□□□ -1.11
CAPN3-202ENST00000337571 OR2A7Q96R45 310 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 Q9H521 79 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 SLC2A8Q9NY64 477 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 ANXA10Q9UJ72 324 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 ADAM30Q9UKF2 790 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 SPATA2Q9UM82 520 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 ZNF257Q9Y2Q1 563 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 STAB2Q8WWQ8 2551 aa8.11□□□□□ -1.11
CAPN3-202ENST00000337571 HUWE1Q7Z6Z7 4374 aaKnown RBP8.1□□□□□ -1.11
CAPN3-202ENST00000337571 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 TMEM235A6NFC5 223 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
CAPN3-202ENST00000337571 OR2J3O76001 311 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 TPPPO94811 219 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 DEFA4P12838 97 aa8.1□□□□□ -1.11
CAPN3-202ENST00000337571 ARPC4P59998 168 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms