RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 ZP3P21754 424 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 CHRNA7P36544 502 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 OR3A3P47888 321 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 MMDQ15546 238 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 Q6ZS49 121 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 SPATA2Q9UM82 520 aa11.08□□□□□ -0.64
CTHRC1-201ENST00000330295 TRAV18A0A075B6X5 111 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 H7C2Y5 167 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 RBBP9O75884 186 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 APOA2P02652 100 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 GSTT2P0CG29 244 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 GSTT2BP0CG30 244 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 CBX3Q13185 183 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 ODF3L1Q8IXM7 274 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 ABHD14BQ96IU4 210 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 CABLES2Q9BTV7 478 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 FUNDC2Q9BWH2 189 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 RNF150Q9ULK6 438 aa11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
CTHRC1-201ENST00000330295 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 CSN3P07498 182 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 BMI1P35226 326 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 RPS19P39019 145 aaKnown RBP11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 TCTAP57738 103 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 ACTBP60709 375 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 RPL39P5Q59GN2 51 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 RHOVQ96L33 236 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 RNF5Q99942 180 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 MRPS26Q9BYN8 205 aaKnown RBP11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
CTHRC1-201ENST00000330295 IGKV1-6A0A0C4DH72 117 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 SMIM31A0A1B0GVY4 71 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 NBR2O15453 112 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 HLA-DRB1P01911 266 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 CBX5P45973 191 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 MECP2P51608 486 aaKnown RBP11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 SYNJ2BPP57105 145 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 PLGLAQ15195 96 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 CNIH2Q6PI25 160 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 FAM131AQ6UXB0 335 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 OR13F1Q8NGS4 319 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 OR5H6Q8NGV6 325 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 NUDCD2Q8WVJ2 157 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 MAFIPQ8WZ33 124 aa11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
CTHRC1-201ENST00000330295 ZNF785A8K8V0 405 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 M0R1X1 148 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 SLC22A5O76082 557 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 CT45A6P0DMU7 189 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 CT45A5P0DMU8 189 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 CT45A7P0DMV0 189 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 ARPC4P59998 168 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 LCE2CQ5TA81 110 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 GPR141Q7Z602 305 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 SAMD12Q8N8I0 201 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 OR5AN1Q8NGI8 311 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 ACOT12Q8WYK0 555 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 SLC25A46Q96AG3 418 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 TSNAXQ99598 290 aaKnown RBP11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 OR2D2Q9H210 308 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 GAB2Q9UQC2 676 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
CTHRC1-201ENST00000330295 H0YJW9 148 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 RRASP10301 218 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 RORCP51449 518 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 TPPP2P59282 170 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 VBP1P61758 197 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 TMEM69Q5SWH9 247 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 PYHIN1Q6K0P9 492 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 TCTEX1D1Q8N7M0 179 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 NPBQ8NG41 125 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms