RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 WIPF3A6NGB9 483 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 SCGB2A1O75556 95 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 PRR30Q53SZ7 412 aaPredicted RBP9.96□□□□□ -0.81
DDR1-223ENST00000324771 SNRNP40Q96DI7 357 aaKnown RBP9.96□□□□□ -0.81
DDR1-223ENST00000324771 ZNF714Q96N38 554 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 RPRMQ9NS64 109 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 TMEM140Q9NV12 185 aa9.96□□□□□ -0.81
DDR1-223ENST00000324771 PTPRSQ13332 1948 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 PGA5P0DJD9 388 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 TAS2R45P59539 299 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 TNFRSF9Q07011 255 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 MMDQ15546 238 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 C1orf147Q96MC9 270 aaPredicted RBP9.96□□□□□ -0.82
DDR1-223ENST00000324771 LYRM2Q9NU23 88 aaPredicted RBP9.96□□□□□ -0.82
DDR1-223ENST00000324771 IGHV3-35A0A0C4DH35 117 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 NTF3P20783 257 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 CORO2AQ92828 525 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 GALNT14Q96FL9 552 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 SFXN3Q9BWM7 321 aa9.96□□□□□ -0.82
DDR1-223ENST00000324771 USP9XQ93008 2570 aaPredicted RBP9.96□□□□□ -0.82
DDR1-223ENST00000324771 IGKV3-7A0A075B6H7 116 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 H3BTX0 84 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 CD1BP29016 333 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 ERVFRD-1P60508 538 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 SS18L1O75177 396 aaPredicted RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 FABP4P15090 132 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 CSRP1P21291 193 aaKnown RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 NRN1LQ496H8 165 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 OR1B1Q8NGR6 318 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 OR51B2Q9Y5P1 312 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 HPRT1P00492 218 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 GAPDHP04406 335 aaKnown RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
DDR1-223ENST00000324771 UCP1P25874 307 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 UCP3P55916 312 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 LYZP61626 148 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 MRGPRGQ86SM5 289 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 LDLRAD3Q86YD5 345 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 COMMD1Q8N668 190 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 HIF1ANQ9NWT6 349 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 HIVEP3Q5T1R4 2406 aa9.95□□□□□ -0.82
DDR1-223ENST00000324771 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 ETV2O00321 342 aaPredicted RBP9.94□□□□□ -0.82
DDR1-223ENST00000324771 PITX3O75364 302 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 TMPRSS3P57727 454 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 MUC15Q8N387 334 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 FAM57AQ8TBR7 257 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 TAF15Q92804 592 aaKnown RBP eCLIP9.94□□□□□ -0.82
DDR1-223ENST00000324771 IGHV3OR16-10A0A075B7F0 116 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 CLDN34H7C241 214 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 ACAA1P09110 424 aaPredicted RBP9.94□□□□□ -0.82
DDR1-223ENST00000324771 PRRX1P54821 245 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 SLC35B1P78383 322 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 LHFPL1Q86WI0 220 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 H1FOOQ8IZA3 346 aaPredicted RBP9.94□□□□□ -0.82
DDR1-223ENST00000324771 GP6Q9HCN6 339 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 EYSQ5T1H1 3165 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 CXorf65A6NEN9 183 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 IQCF6A8MYZ5 107 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 LY6HO94772 140 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 CD24P25063 80 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 RND3P61587 244 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 HABP2Q14520 560 aaPredicted RBP9.94□□□□□ -0.82
DDR1-223ENST00000324771 BSXQ3C1V8 233 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 ZBTB34Q8NCN2 500 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 NAV2Q8IVL1 2488 aa9.94□□□□□ -0.82
DDR1-223ENST00000324771 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
DDR1-223ENST00000324771 Q56UQ5 140 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 SLC35E3Q7Z769 313 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 SLC24A4Q8NFF2 622 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 OR8B3Q8NGG8 313 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 ADTRPQ96IZ2 230 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 OR8B2Q96RD0 313 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 TMUB1Q9BVT8 246 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 LIME1Q9H400 295 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 ZDHHC11Q9H8X9 412 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 S4R3C0 116 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 OR10J1P30954 320 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 THBS3P49746 956 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 NEIL1Q96FI4 390 aaPredicted RBP9.93□□□□□ -0.82
DDR1-223ENST00000324771 FAM210BQ96KR6 192 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 VPS25Q9BRG1 176 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 FAM103A1Q9BTL3 118 aaKnown RBP9.93□□□□□ -0.82
DDR1-223ENST00000324771 SH2D2AQ9NP31 389 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 K7EM74 188 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 TGOLN2O43493 480 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 RHOBP62745 196 aa9.93□□□□□ -0.82
DDR1-223ENST00000324771 SUMO1P63165 101 aaKnown RBP9.93□□□□□ -0.82
DDR1-223ENST00000324771 PEAR1Q5VY43 1037 aaPredicted RBP9.93□□□□□ -0.82
DDR1-223ENST00000324771 DTX1Q86Y01 620 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms