RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 C1orf122Q6ZSJ8 110 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 HSD17B13Q7Z5P4 300 aaPredicted RBP14.53□□□□□ -0.08
RAB39A-201ENST00000320578 PDPNQ86YL7 162 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 DTD1Q8TEA8 209 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 CITED4Q96RK1 184 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 MRPL20Q9BYC9 149 aaKnown RBP14.53□□□□□ -0.08
RAB39A-201ENST00000320578 REG4Q9BYZ8 158 aa14.53□□□□□ -0.08
RAB39A-201ENST00000320578 IGHV2-26A0A0B4J1V2 119 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 MFSD2BA6NFX1 497 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 NUDT19A8MXV4 375 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 RBMXL2O75526 392 aaKnown RBP14.52□□□□□ -0.08
RAB39A-201ENST00000320578 PUSL1Q8N0Z8 303 aaKnown RBP14.52□□□□□ -0.08
RAB39A-201ENST00000320578 OR13D1Q8NGV5 346 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 NABP2Q9BQ15 211 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 CLEC7AQ9BXN2 247 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 QTRT1Q9BXR0 403 aaKnown RBP14.52□□□□□ -0.08
RAB39A-201ENST00000320578 PARD6GQ9BYG4 376 aaPredicted RBP14.52□□□□□ -0.08
RAB39A-201ENST00000320578 ZNRD1Q9P1U0 126 aa14.52□□□□□ -0.08
RAB39A-201ENST00000320578 FOXA2Q9Y261 457 aaPredicted RBP14.52□□□□□ -0.08
RAB39A-201ENST00000320578 LOC105371242A0A075B767 164 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 C15orf61A6NNL5 157 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 C22orf46C9J442 243 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 MC5RP33032 325 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 BLOC1S1P78537 153 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 HLA-DRB5Q30154 266 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 OR4A47Q6IF82 309 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 KIR3DL3Q8N743 410 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 GNPNAT1Q96EK6 184 aaPredicted RBP14.52□□□□□ -0.09
RAB39A-201ENST00000320578 TSNAXQ99598 290 aaKnown RBP14.52□□□□□ -0.09
RAB39A-201ENST00000320578 BET1LQ9NYM9 111 aa14.52□□□□□ -0.09
RAB39A-201ENST00000320578 RAB13P51153 203 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 CLINT1Q14677 625 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 ATP6V1FQ16864 119 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 SSX9Q7RTT3 188 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 TMEM14BQ9NUH8 114 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 PRNDQ9UKY0 176 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 STRAPQ9Y3F4 350 aaKnown RBP14.51□□□□□ -0.09
RAB39A-201ENST00000320578 AMMECR1Q9Y4X0 333 aaPredicted RBP14.51□□□□□ -0.09
RAB39A-201ENST00000320578 MALRD1Q5VYJ5 2156 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 YLPM1P49750 1951 aaKnown RBP14.51□□□□□ -0.09
RAB39A-201ENST00000320578 DOPEY1Q5JWR5 2465 aa14.51□□□□□ -0.09
RAB39A-201ENST00000320578 CEBPZOSA8MTT3 80 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 H3BP45 60 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 RPP30P78346 268 aaKnown RBP14.5□□□□□ -0.09
RAB39A-201ENST00000320578 AANATQ16613 207 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 SPANXN5Q5MJ07 72 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 TGIF2LXQ8IUE1 241 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 TMEM217Q8N7C4 229 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 LHX4Q969G2 390 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 ZNF257Q9Y2Q1 563 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 NDUFS7O75251 213 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 FBXO24O75426 580 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 IFNA5P01569 189 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 IFNA17P01571 189 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 FGF2P09038 288 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 OR8U8P0C7N1 319 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 TMEM267Q0VDI3 215 aaPredicted RBP14.5□□□□□ -0.09
RAB39A-201ENST00000320578 VKORC1L1Q8N0U8 176 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 OR4C13Q8NGP0 309 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 OR4A5Q8NH83 315 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 CLCC1Q96S66 551 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 PARP11Q9NR21 331 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 FKBP11Q9NYL4 201 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 WASHC3Q9Y3C0 194 aa14.5□□□□□ -0.09
RAB39A-201ENST00000320578 ZNF705EA8MWA4 302 aaPredicted RBP14.49□□□□□ -0.09
RAB39A-201ENST00000320578 A8MXK9 166 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 UPK2O00526 184 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 IGHV2-5P01817 119 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 IGKV1-16P04430 117 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 ARG1P05089 322 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 METTL15P1P0C7V9 234 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 RNF224P0DH78 156 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 VDAC2P45880 294 aaPredicted RBP14.49□□□□□ -0.09
RAB39A-201ENST00000320578 HSPE1P61604 102 aaKnown RBP14.49□□□□□ -0.09
RAB39A-201ENST00000320578 HAPLN4Q86UW8 402 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 OR11H6Q8NGC7 330 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 FLYWCH2Q96CP2 140 aaKnown RBP14.49□□□□□ -0.09
RAB39A-201ENST00000320578 UNKLQ9H9P5 680 aaKnown RBP14.49□□□□□ -0.09
RAB39A-201ENST00000320578 PLA2G2EQ9NZK7 142 aa14.49□□□□□ -0.09
RAB39A-201ENST00000320578 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
RAB39A-201ENST00000320578 HRNRQ86YZ3 2850 aaPredicted RBP14.48□□□□□ -0.09
RAB39A-201ENST00000320578 RAB19A4D1S5 217 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 PMS2P5A8MQ11 134 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 UMAD1C9J7I0 102 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 BUB1B-PAK6H3BSN5 160 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 TRIM77I1YAP6 450 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 PRTN3P24158 256 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 OR2B8PP59922 312 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 ZNF525Q8N782 197 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 Q8N7P7 452 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 PINX1Q96BK5 328 aaKnown RBP14.48□□□□□ -0.09
RAB39A-201ENST00000320578 OR4C12Q96R67 309 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 NUP50Q9UKX7 468 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 TCF19Q9Y242 345 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 TRAV3A0A0B4J244 114 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 SRRM4A7MD48 611 aaKnown RBP14.48□□□□□ -0.09
RAB39A-201ENST00000320578 SHOXO15266 292 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 ATP6V0CP27449 155 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 PDLIM4P50479 330 aa14.48□□□□□ -0.09
RAB39A-201ENST00000320578 ARL16Q0P5N6 197 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms