RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 E7EUB6 86 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 SLC22A5O76082 557 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 TPPP2P59282 170 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 CDK10Q15131 360 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 ZNF66Q6ZN08 573 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 ANKRD13BQ86YJ7 626 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 GIMAP1Q8WWP7 306 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 HSD17B10Q99714 261 aaKnown RBP11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 TAS2R8Q9NYW2 309 aa11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
PPP1CA-201ENST00000312989 TEX22C9J3V5 150 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 LINC01619G3V211 115 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 RAMP3O60896 148 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 TRGV3P03979 118 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 CBX5P45973 191 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 ALDH3B2P48448 385 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 ARPC4P59998 168 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 DGCR2P98153 550 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 ZNF45Q02386 682 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
PPP1CA-201ENST00000312989 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 CGB1A6NKQ9 187 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 TNFSF12O43508 249 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 APELAP0DMC3 54 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 GNRHRP30968 328 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 CBX3Q13185 183 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 TNXAQ16473 311 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 DHRS11Q6UWP2 260 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 OR4S2Q8NH73 311 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 TMEM167AQ8TBQ9 72 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 GPX8Q8TED1 209 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 TCTEX1D2Q8WW35 142 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 DPF1Q92782 380 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 CMTM3Q96MX0 182 aa11.21□□□□□ -0.61
PPP1CA-201ENST00000312989 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 OVOL1O14753 267 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 KBTBD11O94819 623 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 CNIH1O95406 144 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 APOA1P02647 267 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 HSPB1P04792 205 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 ELK1P19419 428 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 RFX2P48378 723 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 ACSM6Q6P461 480 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 FXYD6Q9H0Q3 95 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 COMMD3Q9UBI1 195 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 PRELID3BQ9Y3B1 194 aa11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 KMT2CQ8NEZ4 4911 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-201ENST00000312989 RBFOX2O43251 390 aaKnown RBP eCLIP11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 MYOD1P15172 320 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 POU2AF1Q16633 256 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 KLK9Q2XQG4 91 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 IL34Q6ZMJ4 242 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 MMD2Q8IY49 270 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 ZBTB34Q8NCN2 500 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 MOB3AQ96BX8 217 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 PRR25Q96S07 402 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 SLC5A7Q9GZV3 580 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 ADAM30Q9UKF2 790 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 KLK9Q9UKQ9 250 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 TNCP24821 2201 aa11.19□□□□□ -0.62
PPP1CA-201ENST00000312989 HPGDSO60760 199 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 OR2A4O95047 310 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 PRH1P02810 166 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 INSL3P51460 131 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 FXYD4P59646 89 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 ACOT12Q8WYK0 555 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 OR2A7Q96R45 310 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
PPP1CA-201ENST00000312989 HMX3A6NHT5 357 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 SULT1C2O00338 296 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 PMP2P02689 132 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 ZNF735P0CB33 412 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 PRSS3P35030 304 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 ECI1P42126 302 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 GPR107Q5VW38 600 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 OR4A47Q6IF82 309 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 TMEM17Q86X19 198 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
PPP1CA-201ENST00000312989 DCUN1D5Q9BTE7 237 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms