RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 VDAC1P21796 283 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 PSMB8P28062 276 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 TSPAN5P62079 268 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 RPL23AP62750 156 aaKnown RBP9.38□□□□□ -0.91
SCFD1-201ENST00000311943 SPAG16Q8N0X2 631 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 MMP27Q9H306 513 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
SCFD1-201ENST00000311943 S1PR2O95136 353 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 IGHG4P01861 327 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF735P0CB33 412 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 IGLL1P15814 213 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 RCVRNP35243 200 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 PPP5CP53041 499 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 HERV-K104P61576 105 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF79Q15937 498 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 TNXAQ16473 311 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 RTL8BQ17RB0 113 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 IZUMO4Q1ZYL8 232 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF585BQ52M93 769 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF562Q6V9R5 426 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 FCAMRQ8WWV6 532 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 RAX2Q96IS3 184 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 SOSTQ9BQB4 213 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 SCPEP1Q9HB40 452 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 V9GYH0 126 aa9.38□□□□□ -0.91
SCFD1-201ENST00000311943 MSGN1A6NI15 193 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 RBBP9O75884 186 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 IGLV1-40P01703 118 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 TSNAXQ99598 290 aaKnown RBP9.37□□□□□ -0.91
SCFD1-201ENST00000311943 BCL7BQ9BQE9 202 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 NSG2Q9Y328 171 aa9.37□□□□□ -0.91
SCFD1-201ENST00000311943 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 CNIH1O95406 144 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 TAS2R46P59540 309 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 PRSS8Q16651 343 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 HSD17B10Q99714 261 aaKnown RBP9.36□□□□□ -0.91
SCFD1-201ENST00000311943 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 GABARAPH6UMI1 98 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 LGALS7P47929 136 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 RAB9AP51151 201 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 UBE2KP61086 200 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 SLC35B1P78383 322 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 DEFA6Q01524 100 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 RNASE10Q5GAN6 216 aaKnown RBP9.36□□□□□ -0.91
SCFD1-201ENST00000311943 MRPL41Q8IXM3 137 aaKnown RBP9.36□□□□□ -0.91
SCFD1-201ENST00000311943 OR4C16Q8NGL9 310 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 SMIM4Q8WVI0 70 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 RHOVQ96L33 236 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 RNF5Q99942 180 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 PRR13Q9NZ81 148 aa9.36□□□□□ -0.91
SCFD1-201ENST00000311943 IGKV1-39P01597 117 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 IGKV1D-39P04432 117 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 REG1AP05451 166 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 SP6Q3SY56 376 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 ACTBL2Q562R1 376 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 VAX1Q5SQQ9 334 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 OR4A47Q6IF82 309 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF66Q6ZN08 573 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 TBC1D26Q86UD7 250 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 SRSF12Q8WXF0 261 aaKnown RBP9.35□□□□□ -0.91
SCFD1-201ENST00000311943 ADTRPQ96IZ2 230 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 PRELID3BQ9Y3B1 194 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 S4R3C0 116 aa9.35□□□□□ -0.91
SCFD1-201ENST00000311943 RAB3DO95716 219 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 IL6RP08887 468 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 AREGP15514 252 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 G6PCP35575 357 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 LPAR6P43657 344 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 RAB25P57735 213 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 FOXE3Q13461 319 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF491Q8N8L2 437 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 ZNF355PQ9NSJ1 428 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 SPDEFO95238 335 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 KRASP01116 189 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 CD74P04233 296 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 HOXD3P31249 432 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 CXorf66Q5JRM2 361 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-201ENST00000311943 LINC00482Q8N8I6 264 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 OR13C8Q8NGS7 320 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 MYOZ3Q8TDC0 251 aa9.34□□□□□ -0.91
SCFD1-201ENST00000311943 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms