RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 HLA-DRB1P01911 266 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 VSIG10L2P0DP72 767 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 PROK1P58294 105 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 RND3P61587 244 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 VKORC1L1Q8N0U8 176 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 SCGB3A2Q96PL1 93 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 GPR132Q9UNW8 380 aa17.68■□□□□ 0.42
HOXD4-201ENST00000306324 NAP1L6A6NFF2 107 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 LINC01548A6NM66 108 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 FCN1O00602 326 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 KCNAB3O43448 404 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 HPRT1P00492 218 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 C3orf56Q8N813 242 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 RTBDNQ9BSG5 229 aaPredicted RBP17.67■□□□□ 0.42
HOXD4-201ENST00000306324 C5orf66Q9H5L9 145 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 LINC00527Q9UJ94 153 aa17.67■□□□□ 0.42
HOXD4-201ENST00000306324 S1PR2O95136 353 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 HRASP01112 189 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 SAA1P0DJI8 122 aaPredicted RBP17.66■□□□□ 0.42
HOXD4-201ENST00000306324 UBE2KP61086 200 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 SSX9Q7RTT3 188 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 PPP1R27Q86WC6 154 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 FOXRED2Q8IWF2 684 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 KLHDC1Q8N7A1 406 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 TCTEX1D1Q8N7M0 179 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 VSIG4Q9Y279 399 aa17.66■□□□□ 0.42
HOXD4-201ENST00000306324 CA2P00918 260 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 LPAR6P43657 344 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 CCR6P51684 374 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 TEX45Q8NA69 505 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 RHOVQ96L33 236 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 NOL4LQ96MY1 436 aaPredicted RBP17.65■□□□□ 0.42
HOXD4-201ENST00000306324 C7orf50Q9BRJ6 194 aaKnown RBP17.65■□□□□ 0.42
HOXD4-201ENST00000306324 PLEKHA2Q9HB19 425 aa17.65■□□□□ 0.42
HOXD4-201ENST00000306324 IGHV7-81A0A0B4J1V7 117 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 CRYGBP07316 175 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 TAS2R31P59538 309 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 PJVKQ0ZLH3 352 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 ZNF585BQ52M93 769 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 WFDC12Q8WWY7 111 aa17.64■□□□□ 0.41
HOXD4-201ENST00000306324 TEX13DA0A0J9YY54 714 aaPredicted RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 C3orf85A0A1B0GTC6 90 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 AP4M1O00189 453 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 PLA2G10O15496 165 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 RPA2P15927 270 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 NQO2P16083 231 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 GNB1P62873 340 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 CX3CL1P78423 397 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 CENPVQ7Z7K6 275 aaPredicted RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 DMBX1Q8NFW5 382 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 ABHD5Q8WTS1 349 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 TP53RKQ96S44 253 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 SLC25A21Q9BQT8 299 aaPredicted RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 AIFM2Q9BRQ8 373 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 OR51J1Q9H342 316 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 PARP11Q9NR21 331 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 COMMD9Q9P000 198 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 H0Y980 276 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 LYRM1O43325 122 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 OR2A4O95047 310 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 SERPINE2P07093 398 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 RBMS2Q15434 407 aaKnown RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 TMED4Q7Z7H5 227 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 ADAD2Q8NCV1 583 aaKnown RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 VSTM2AQ8TAG5 236 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 R3HDM4Q96D70 268 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 OR2A7Q96R45 310 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 WNT10AQ9GZT5 417 aa17.63■□□□□ 0.41
HOXD4-201ENST00000306324 FAM212BQ9NTI7 297 aaPredicted RBP17.63■□□□□ 0.41
HOXD4-201ENST00000306324 ATP6V0E1O15342 81 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 UPK1BO75841 260 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 CNIH1O95406 144 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 AKR1C4P17516 323 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 ERVK-16P61578 105 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 NDPQ00604 133 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 SRSF4Q08170 494 aaKnown RBP17.62■□□□□ 0.41
HOXD4-201ENST00000306324 SP6Q3SY56 376 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 ZNF562Q6V9R5 426 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 STPG2Q8N412 459 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 NAA60Q9H7X0 242 aa17.62■□□□□ 0.41
HOXD4-201ENST00000306324 MARCH11A6NNE9 402 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 KBTBD11O94819 623 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 KRASP01116 189 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 BTCP35070 178 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 PRSS8Q16651 343 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 OR4A47Q6IF82 309 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 PUSL1Q8N0Z8 303 aaKnown RBP17.61■□□□□ 0.41
HOXD4-201ENST00000306324 CHPT1Q8WUD6 406 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 TMEM230Q96A57 120 aa17.61■□□□□ 0.41
HOXD4-201ENST00000306324 ZNF430Q9H8G1 570 aaPredicted RBP17.61■□□□□ 0.41
HOXD4-201ENST00000306324 CRYM-AS1A6NIL9 109 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 CREBL2O60519 120 aaPredicted RBP17.6■□□□□ 0.41
HOXD4-201ENST00000306324 G6PCP35575 357 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 KRTAP10-3P60369 221 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 FXYD3Q14802 87 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 TNXAQ16473 311 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 MRGPRG-AS1Q2M3A8 158 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 SGPP2Q8IWX5 399 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 C11orf44Q8N8P7 122 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 SPATA3Q8NHX4 192 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms