RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PIEZO2Q9H5I5 2752 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 A0A1W2PPE3 182 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 DVL1O14640 695 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 SNAPINO95295 136 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 HRASP01112 189 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 BTN1A1Q13410 526 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 TAF15Q92804 592 aaKnown RBP eCLIP15.93■□□□□ 0.14
HOXC4-201ENST00000303406 RBMXL1Q96E39 390 aaKnown RBP15.93■□□□□ 0.14
HOXC4-201ENST00000303406 KIAA1456Q9P272 454 aa15.93■□□□□ 0.14
HOXC4-201ENST00000303406 MAP1BP46821 2468 aaKnown RBP15.92■□□□□ 0.14
HOXC4-201ENST00000303406 A0A087X0M5 115 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 A0A1B0GX30 115 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 C15orf61A6NNL5 157 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 DLL1O00548 723 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 GNG10P50151 68 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 DLX6P56179 175 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM155Q4W5P6 130 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 ZDHHC16Q969W1 377 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 FOXA2Q9Y261 457 aaPredicted RBP15.92■□□□□ 0.14
HOXC4-201ENST00000303406 RFNGQ9Y644 331 aa15.92■□□□□ 0.14
HOXC4-201ENST00000303406 TMEM8BA6NDV4 472 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 GPR37O15354 613 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 IFNA17P01571 189 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 IL6RP08887 468 aaPredicted RBP15.91■□□□□ 0.14
HOXC4-201ENST00000303406 CT45A6P0DMU7 189 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 CT45A5P0DMU8 189 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 CT45A7P0DMV0 189 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 VDAC2P45880 294 aaPredicted RBP15.91■□□□□ 0.14
HOXC4-201ENST00000303406 CDSNQ15517 529 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 RTL8BQ17RB0 113 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 FBXO7Q9Y3I1 522 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 ATMQ13315 3056 aa15.91■□□□□ 0.14
HOXC4-201ENST00000303406 PCNX1Q96RV3 2341 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 ICE1Q9Y2F5 2266 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 C15orf62A8K5M9 175 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 DNASE2O00115 360 aaPredicted RBP15.9■□□□□ 0.14
HOXC4-201ENST00000303406 CCL3L1P16619 93 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 OR2B8PP59922 312 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 GUCA2BQ16661 112 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 OR8G2PQ6IF36 304 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 MBD3L1Q8WWY6 194 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 H1FXQ92522 213 aaKnown RBP15.9■□□□□ 0.14
HOXC4-201ENST00000303406 RHOVQ96L33 236 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 GGACTQ9BVM4 153 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 SLC35D1Q9NTN3 355 aa15.9■□□□□ 0.14
HOXC4-201ENST00000303406 ARFGEF3Q5TH69 2177 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 C9JQL5 133 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 SOX15O60248 233 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 MDKP21741 143 aaPredicted RBP15.89■□□□□ 0.13
HOXC4-201ENST00000303406 ZNF137PP52743 207 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 TMEM41BQ5BJD5 291 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 OR4A47Q6IF82 309 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 SSX9Q7RTT3 188 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 RSG1Q9BU20 258 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 TMEM14BQ9NUH8 114 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 TMA7Q9Y2S6 64 aaKnown RBP15.89■□□□□ 0.13
HOXC4-201ENST00000303406 UBE2L5PA0A1B0GUS4 154 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 IGHV2-70P01814 119 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 TMEM186Q96B77 213 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 EIF5A2Q9GZV4 153 aaKnown RBP15.89■□□□□ 0.13
HOXC4-201ENST00000303406 PRNDQ9UKY0 176 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 TCF19Q9Y242 345 aa15.89■□□□□ 0.13
HOXC4-201ENST00000303406 IGF2RP11717 2491 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 MBP02144 154 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 APOA2P02652 100 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 HSPE1P61604 102 aaKnown RBP15.88■□□□□ 0.13
HOXC4-201ENST00000303406 LY6DQ14210 128 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 OSR1Q8TAX0 266 aaPredicted RBP15.88■□□□□ 0.13
HOXC4-201ENST00000303406 TNFRSF14Q92956 283 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 RAB1BQ9H0U4 201 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 SLC35B3Q9H1N7 401 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 RPRMQ9NS64 109 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 CBLN4Q9NTU7 201 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 ZNF257Q9Y2Q1 563 aa15.88■□□□□ 0.13
HOXC4-201ENST00000303406 RBFOX3A6NFN3 312 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 J3QR06 171 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 RBP4P02753 201 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 AGAP20933 346 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 VKORC1L1Q8N0U8 176 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 OR5AN1Q8NGI8 311 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 OR13D1Q8NGV5 346 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 OR9G1Q8NH87 305 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 BET1LQ9NYM9 111 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 RALYQ9UKM9 306 aaKnown RBP15.87■□□□□ 0.13
HOXC4-201ENST00000303406 HCFC1P51610 2035 aa15.87■□□□□ 0.13
HOXC4-201ENST00000303406 TRAV3A0A0B4J244 114 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 UPK2O00526 184 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 COL8A2P25067 703 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 PPT1P50897 306 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 ATP5IP56385 69 aaPredicted RBP15.86■□□□□ 0.13
HOXC4-201ENST00000303406 PMS2P11Q13670 270 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 TMEM177Q53S58 311 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 ZNF506Q5JVG8 444 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 C11orf71Q6IPW1 123 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 SFT2D1Q8WV19 159 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 NEU4Q8WWR8 484 aaPredicted RBP15.86■□□□□ 0.13
HOXC4-201ENST00000303406 PCGF1Q9BSM1 259 aa15.86■□□□□ 0.13
HOXC4-201ENST00000303406 HEYLQ9NQ87 328 aaPredicted RBP15.86■□□□□ 0.13
HOXC4-201ENST00000303406 A0A1W2PPH5 198 aa15.85■□□□□ 0.13
HOXC4-201ENST00000303406 MED19A0JLT2 244 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms