RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CCL28Q9NRJ3 127 aa8.66□□□□□ -1.02
CLCC1-201ENST00000302500 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
CLCC1-201ENST00000302500 MEIS3P1A6NDR6 274 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 SHOXO15266 292 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCC1-201ENST00000302500 ZNF616Q08AN1 781 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 CDK10Q15131 360 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 RTL8BQ17RB0 113 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 C10orf55Q5SWW7 151 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 UNQ5815/PRO19632Q6UWF5 114 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 IL34Q6ZMJ4 242 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 ZNF66Q6ZN08 573 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 VKORC1L1Q8N0U8 176 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 POC5Q8NA72 575 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.02
CLCC1-201ENST00000302500 S100A16Q96FQ6 103 aaKnown RBP8.65□□□□□ -1.02
CLCC1-201ENST00000302500 HSD17B10Q99714 261 aaKnown RBP8.65□□□□□ -1.02
CLCC1-201ENST00000302500 TINAGL1Q9GZM7 467 aaPredicted RBP8.65□□□□□ -1.02
CLCC1-201ENST00000302500 FXYD6Q9H0Q3 95 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 SLA2Q9H6Q3 261 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 DIABLOQ9NR28 239 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.02
CLCC1-201ENST00000302500 J3QRK9 145 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 HPGDSO60760 199 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 FCGR3BO75015 233 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 FCER2P06734 321 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 ZNF735P0CB33 412 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 CBX5P45973 191 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 RFX2P48378 723 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 OR1N2Q8NGR9 330 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 GRPEL2Q8TAA5 225 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 SRSF12Q8WXF0 261 aaKnown RBP8.64□□□□□ -1.03
CLCC1-201ENST00000302500 DCUN1D4Q92564 292 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 TMEM68Q96MH6 324 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
CLCC1-201ENST00000302500 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
CLCC1-201ENST00000302500 VCX3AQ9NNX9 186 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 A3GALT2U3KPV4 340 aa8.64□□□□□ -1.03
CLCC1-201ENST00000302500 KBTBD11O94819 623 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 TRBV12-3P01733 135 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 FGF2P09038 288 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 OR8U8P0C7N1 319 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 SLURP1P55000 103 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 DEFA5Q01523 94 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 TMEM267Q0VDI3 215 aaPredicted RBP8.63□□□□□ -1.03
CLCC1-201ENST00000302500 SPCS2Q15005 226 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 PLGLAQ15195 96 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 GPR107Q5VW38 600 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 ZNF343Q6P1L6 599 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 CADM3Q8N126 398 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 ZBTB34Q8NCN2 500 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 MRAPQ8TCY5 172 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 ACOT12Q8WYK0 555 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 MRGPRFQ96AM1 343 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 OR5B12Q96R08 314 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 RYR3Q15413 4870 aa8.63□□□□□ -1.03
CLCC1-201ENST00000302500 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 CRYGCP07315 174 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 MYOD1P15172 320 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 ARPC4P59998 168 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 OR2B11Q5JQS5 317 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 ACSM6Q6P461 480 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 TMEM65Q6PI78 240 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 C19orf35Q6ZS72 473 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 LHFPL1Q86WI0 220 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 OR5T1Q8NG75 326 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 DYNC2LI1Q8TCX1 351 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 SECTM1Q8WVN6 248 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 MS4A10Q96PG2 267 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 FANCD2OSQ96PS1 177 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 SCPEP1Q9HB40 452 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
CLCC1-201ENST00000302500 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
CLCC1-201ENST00000302500 SEC14L6B5MCN3 397 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 LINC01619G3V211 115 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 TNFSF12O43508 249 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 TPPPO94811 219 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 IGHV3-11P01762 117 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 HSPB1P04792 205 aaKnown RBP8.61□□□□□ -1.03
CLCC1-201ENST00000302500 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
CLCC1-201ENST00000302500 PRSS3P35030 304 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 HRH1P35367 487 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 RORCP51449 518 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 MECP2P51608 486 aaKnown RBP8.61□□□□□ -1.03
CLCC1-201ENST00000302500 TPPP2P59282 170 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 KLF5Q13887 457 aaPredicted RBP8.61□□□□□ -1.03
CLCC1-201ENST00000302500 VMA21Q3ZAQ7 101 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 VAX1Q5SQQ9 334 aa8.61□□□□□ -1.03
CLCC1-201ENST00000302500 C9orf66Q5T8R8 295 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms