RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 WIPI2Q9Y4P8 454 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 CACNA1HO95180 2353 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 IGHV2-70DA0A0C4DH43 119 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 A0A1W2PR80 420 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 SPATA45Q537H7 98 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 ATP5SQ99766 215 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 PARLQ9H300 379 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 SLC45A2Q9UMX9 530 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 PXMP4Q9Y6I8 212 aa16.92■□□□□ 0.3
HPS6-201ENST00000299238 F2Z2F3 143 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 PSG2P11465 335 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 PAX9P55771 341 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 ZNF737O75373 536 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 HYPMO75409 117 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 SERF1AO75920 110 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 HNRNPA3P51991 378 aaKnown RBP16.91■□□□□ 0.3
HPS6-201ENST00000299238 SRSF6Q13247 344 aaKnown RBP16.91■□□□□ 0.3
HPS6-201ENST00000299238 Q6P435 159 aa16.91■□□□□ 0.3
HPS6-201ENST00000299238 CACNA1DQ01668 2161 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 IGHV2OR16-5A0A0B4J2B6 119 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 HSBP1L1C9JCN9 74 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 CTRLP40313 264 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 TPPP2P59282 170 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 TMEM267Q0VDI3 215 aaPredicted RBP16.9■□□□□ 0.3
HPS6-201ENST00000299238 PIP4P1Q86T03 277 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 GMPPAQ96IJ6 420 aaPredicted RBP16.9■□□□□ 0.3
HPS6-201ENST00000299238 BTF3L4Q96K17 158 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 F6UZH7 168 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 J3QT63 122 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 SH2D1BO14796 132 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 CELA3BP08861 270 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 UBE2G2P60604 165 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 BAXQ07812 192 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 TBC1D28Q2M2D7 210 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 MRGPRGQ86SM5 289 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 GATAD1Q8WUU5 269 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 FBXL7Q9UJT9 491 aa16.9■□□□□ 0.3
HPS6-201ENST00000299238 TTC28Q96AY4 2481 aa16.89■□□□□ 0.3
HPS6-201ENST00000299238 NKX2-8O15522 239 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 KRTDAPP60985 99 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 FFAR4Q5NUL3 377 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 Q6ZRM9 215 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 ZNF295-AS1Q8N0V1 137 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 FAM103A1Q9BTL3 118 aaKnown RBP16.89■□□□□ 0.29
HPS6-201ENST00000299238 RBM7Q9Y580 266 aaKnown RBP16.89■□□□□ 0.29
HPS6-201ENST00000299238 GYPAP02724 150 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 RPL19P84098 196 aaKnown RBP16.89■□□□□ 0.29
HPS6-201ENST00000299238 MEF2BQ02080 365 aaPredicted RBP16.89■□□□□ 0.29
HPS6-201ENST00000299238 OCIAD2Q56VL3 154 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 WDR86Q86TI4 376 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 DEFB124Q8NES8 71 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 GPR146Q96CH1 333 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 AGMATQ9BSE5 352 aa16.89■□□□□ 0.29
HPS6-201ENST00000299238 TMEM238LA0A1B0GVL6 79 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 KIAA1324LA8MWY0 1029 aaPredicted RBP16.88■□□□□ 0.29
HPS6-201ENST00000299238 NPIPB11E5RHQ5 1161 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 SIRPB1O00241 398 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 IGLV2-14P01704 120 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 IGLC2P0DOY2 106 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 IGLC3P0DOY3 106 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 HOXA4Q00056 320 aaPredicted RBP16.88■□□□□ 0.29
HPS6-201ENST00000299238 Q8N976 141 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 RNF2Q99496 336 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 CST9LQ9H4G1 147 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 LAMA5O15230 3695 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 WNT2P09544 360 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 ZNF16P17020 682 aaPredicted RBP16.88■□□□□ 0.29
HPS6-201ENST00000299238 OR5AU1Q8NGC0 362 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 MBD3L1Q8WWY6 194 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 PPP1R3CQ9UQK1 317 aa16.88■□□□□ 0.29
HPS6-201ENST00000299238 DEGS1O15121 323 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 SERPINE2P07093 398 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 CLCF1Q9UBD9 225 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 UQCR10Q9UDW1 63 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 SPAARA0A1B0GVQ0 90 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 SMPD2O60906 423 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 FTH1P19P0C7X4 201 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 IAPPP10997 89 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 IGHV1-2P23083 117 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 SRP14P37108 136 aaKnown RBP16.87■□□□□ 0.29
HPS6-201ENST00000299238 CCL11P51671 97 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 FDCSPQ8NFU4 85 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 OR4B1Q8NGF8 309 aa16.87■□□□□ 0.29
HPS6-201ENST00000299238 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.86■□□□□ 0.29
HPS6-201ENST00000299238 SLC25A6P12236 298 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 S100GP29377 79 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 OR10V1Q8NGI7 309 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 IGKV1-39P01597 117 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 IGKV1D-39P04432 117 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 ERVK11-1P61568 191 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 SUMO1P63165 101 aaKnown RBP16.86■□□□□ 0.29
HPS6-201ENST00000299238 KCNIP4Q6PIL6 250 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 ANAPC16Q96DE5 110 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 SAMD10Q9BYL1 202 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 OTOGLQ3ZCN5 2332 aa16.86■□□□□ 0.29
HPS6-201ENST00000299238 DIRC3C9JPN6 131 aa16.85■□□□□ 0.29
HPS6-201ENST00000299238 LYZL6O75951 148 aa16.85■□□□□ 0.29
HPS6-201ENST00000299238 MSMO1Q15800 293 aa16.85■□□□□ 0.29
HPS6-201ENST00000299238 CLUHP3Q96NS8 147 aa16.85■□□□□ 0.29
HPS6-201ENST00000299238 RTL8AQ9BWD3 113 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms