RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 R3HDM4Q96D70 268 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 OR9G9P0C7N8 305 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 CDKN1AP38936 164 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 F2RL1P55085 397 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 ZNF616Q08AN1 781 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 SPINK9Q5DT21 86 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 OR2G3Q8NGZ4 309 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 DDB2Q92466 427 aa17.5■□□□□ 0.39
SOX17-201ENST00000297316 KLF2Q9Y5W3 355 aaPredicted RBP17.5■□□□□ 0.39
SOX17-201ENST00000297316 ITGB1BP1O14713 200 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 NDUFS7O75251 213 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 IGHV2-70P01814 119 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 SFTA3P0C7M3 94 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 CAMLGP49069 296 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 MEF2CQ06413 473 aaPredicted RBP17.49■□□□□ 0.39
SOX17-201ENST00000297316 VKORC1L1Q8N0U8 176 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 FAM216AQ8WUB2 273 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 ZNF714Q96N38 554 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.49■□□□□ 0.39
SOX17-201ENST00000297316 RPUSD1Q9UJJ7 312 aaKnown RBP17.49■□□□□ 0.39
SOX17-201ENST00000297316 DOPEY1Q5JWR5 2465 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 SSX9Q7RTT3 188 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 DTX2Q86UW9 622 aa17.49■□□□□ 0.39
SOX17-201ENST00000297316 PRH1P02810 166 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 RAB7AP51149 207 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 TAS2R30P59541 319 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 OR2B8PP59922 312 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 LYG1Q8N1E2 194 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 OR4C12Q96R67 309 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 C9JQL5 133 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 CD5P06127 495 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 ZNF525Q8N782 197 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 CD300LFQ8TDQ1 290 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 QTRT1Q9BXR0 403 aaKnown RBP17.48■□□□□ 0.39
SOX17-201ENST00000297316 RAB9BQ9NP90 201 aa17.48■□□□□ 0.39
SOX17-201ENST00000297316 HPRT1P00492 218 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 DAOP14920 347 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 FAM213BQ8TBF2 198 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 GAB2Q9UQC2 676 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 RAB13P51153 203 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 TMEM14EPQ6UXP3 125 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 ZNF841Q6ZN19 808 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 GAL3ST2Q9H3Q3 398 aa17.47■□□□□ 0.39
SOX17-201ENST00000297316 A0A1B0GV50 99 aa17.46■□□□□ 0.39
SOX17-201ENST00000297316 PCP4L1A6NKN8 68 aa17.46■□□□□ 0.39
SOX17-201ENST00000297316 DLX1P56177 255 aa17.46■□□□□ 0.39
SOX17-201ENST00000297316 RPS16P62249 146 aaKnown RBP17.46■□□□□ 0.39
SOX17-201ENST00000297316 MRPS11P82912 194 aaKnown RBP17.46■□□□□ 0.39
SOX17-201ENST00000297316 S1PR3Q99500 378 aa17.46■□□□□ 0.39
SOX17-201ENST00000297316 TRAV3A0A0B4J244 114 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 A6NNC1 897 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 PPIHO43447 177 aaKnown RBP17.46■□□□□ 0.38
SOX17-201ENST00000297316 RBMXL2O75526 392 aaKnown RBP17.46■□□□□ 0.38
SOX17-201ENST00000297316 DFFBO76075 338 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 RAB5CP51148 216 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 HEPN1Q6WQI6 88 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 ZNF843Q8N446 348 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 ZNF383Q8NA42 475 aa17.46■□□□□ 0.38
SOX17-201ENST00000297316 STRAPQ9Y3F4 350 aaKnown RBP17.46■□□□□ 0.38
SOX17-201ENST00000297316 TSPAN15O95858 294 aa17.45■□□□□ 0.38
SOX17-201ENST00000297316 AKR1D1P51857 326 aa17.45■□□□□ 0.38
SOX17-201ENST00000297316 PRB3Q04118 309 aaPredicted RBP17.45■□□□□ 0.38
SOX17-201ENST00000297316 RXFP4Q8TDU9 374 aa17.45■□□□□ 0.38
SOX17-201ENST00000297316 DTD1Q8TEA8 209 aa17.45■□□□□ 0.38
SOX17-201ENST00000297316 SCRT1Q9BWW7 348 aa17.45■□□□□ 0.38
SOX17-201ENST00000297316 FAM157AC9JC47 383 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 RBFOX2O43251 390 aaKnown RBP eCLIP17.44■□□□□ 0.38
SOX17-201ENST00000297316 SNCAP37840 140 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 RPL35P42766 123 aaKnown RBP17.44■□□□□ 0.38
SOX17-201ENST00000297316 DLX6P56179 175 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 OR8G2PQ6IF36 304 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 SLC25A48Q6ZT89 311 aaKnown RBP17.44■□□□□ 0.38
SOX17-201ENST00000297316 THNSL2Q86YJ6 484 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 RSG1Q9BU20 258 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 FBXO7Q9Y3I1 522 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 CRYBA1P05813 215 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 CRYBG3Q68DQ2 2970 aa17.44■□□□□ 0.38
SOX17-201ENST00000297316 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.44■□□□□ 0.38
SOX17-201ENST00000297316 DVL1P1P54792 670 aaPredicted RBP17.43■□□□□ 0.38
SOX17-201ENST00000297316 TMEM155Q4W5P6 130 aa17.43■□□□□ 0.38
SOX17-201ENST00000297316 GNPNAT1Q96EK6 184 aaPredicted RBP17.43■□□□□ 0.38
SOX17-201ENST00000297316 PMS2P5A8MQ11 134 aa17.43■□□□□ 0.38
SOX17-201ENST00000297316 HOXA1P49639 335 aaPredicted RBP17.43■□□□□ 0.38
SOX17-201ENST00000297316 LILRB2Q8N423 598 aa17.43■□□□□ 0.38
SOX17-201ENST00000297316 C11orf42Q8N5U0 333 aa17.43■□□□□ 0.38
SOX17-201ENST00000297316 NEU4Q8WWR8 484 aaPredicted RBP17.43■□□□□ 0.38
SOX17-201ENST00000297316 IFNA5P01569 189 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 SLC38A11Q08AI6 406 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 TMEM140Q9NV12 185 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 CEBPZOSA8MTT3 80 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 CCL20P78556 96 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 PEA15Q15121 130 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 SLC25A24Q6NUK1 477 aa17.42■□□□□ 0.38
SOX17-201ENST00000297316 GPR37O15354 613 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 NQO2P16083 231 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 THBS3P49746 956 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 HBG1P69891 147 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 HBG2P69892 147 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 RELBQ01201 579 aa17.41■□□□□ 0.38
SOX17-201ENST00000297316 AARDQ4LEZ3 155 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms