RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 USMG5Q96IX5 58 aa19.23■□□□□ 0.67
U2AF1-201ENST00000291552 CENPOQ9BU64 300 aa19.23■□□□□ 0.67
U2AF1-201ENST00000291552 RBMX2Q9Y388 322 aaKnown RBP19.23■□□□□ 0.67
U2AF1-201ENST00000291552 FCGR3BO75015 233 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 ATP6V1G2O95670 118 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 PRH1P02810 166 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 EIF4EBP1Q13541 118 aaPredicted RBP19.22■□□□□ 0.67
U2AF1-201ENST00000291552 CDK10Q15131 360 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 OR2B11Q5JQS5 317 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 SFXN4Q6P4A7 337 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 KCTD9Q7L273 389 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 MUC7Q8TAX7 377 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 THAP7Q9BT49 309 aaPredicted RBP19.22■□□□□ 0.67
U2AF1-201ENST00000291552 OR51E2Q9H255 320 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 DCSTAMPQ9H295 470 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 C19orf73Q9NVV2 129 aa19.22■□□□□ 0.67
U2AF1-201ENST00000291552 RRP15Q9Y3B9 282 aaKnown RBP19.22■□□□□ 0.67
U2AF1-201ENST00000291552 TENM2Q9NT68 2774 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 CSN3P07498 182 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 CLEC2LP0C7M8 214 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 CNIH2Q6PI25 160 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 TPRA1Q86W33 373 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 FCGR1BQ92637 280 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 TM2D3Q9BRN9 247 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 RNF167Q9H6Y7 350 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 AKIP1Q9NQ31 210 aa19.21■□□□□ 0.67
U2AF1-201ENST00000291552 TRBV9A0A0B4J1U6 114 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 TUSC2O75896 110 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 CTXN2P0C2S0 81 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 BRWD1-AS2P59051 145 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 RHOGP84095 191 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 RHBDL2Q9NX52 303 aa19.2■□□□□ 0.66
U2AF1-201ENST00000291552 A8MZ25 164 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 BMPR1BO00238 502 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 SDC2P34741 201 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 GNG2P59768 71 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 EXOSC2Q13868 293 aaKnown RBP19.19■□□□□ 0.66
U2AF1-201ENST00000291552 C19orf35Q6ZS72 473 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 VKORC1L1Q8N0U8 176 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 OR5H6Q8NGV6 325 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 SLC25A38Q96DW6 304 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 SSR3Q9UNL2 185 aa19.19■□□□□ 0.66
U2AF1-201ENST00000291552 IZUMO1RA6ND01 250 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 MPPED1O15442 326 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 RPEL1Q2QD12 228 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 CASC10Q5T4H9 136 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 MMD2Q8IY49 270 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 GPHA2Q96T91 129 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 ANXA10Q9UJ72 324 aa19.18■□□□□ 0.66
U2AF1-201ENST00000291552 A0A1B0GW64 132 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 FAM223BA6NKX1 122 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 TEX22C9J3V5 150 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 SCGNO76038 276 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 CD36P16671 472 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 ZNF773Q6PK81 442 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 FAM223AQ8IWN6 122 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 TTC9CQ8N5M4 171 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 DCUN1D5Q9BTE7 237 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 ZMAT4Q9H898 229 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 SIGLEC8Q9NYZ4 499 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 PRELID3BQ9Y3B1 194 aa19.17■□□□□ 0.66
U2AF1-201ENST00000291552 HMX3A6NHT5 357 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 SLC22A5O76082 557 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 OR2A4O95047 310 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 PTHLHP12272 177 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 MECP2P51608 486 aaKnown RBP19.16■□□□□ 0.66
U2AF1-201ENST00000291552 MXD1Q05195 221 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 ADAMTSL5Q6ZMM2 481 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 SGPP2Q8IWX5 399 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 PUSL1Q8N0Z8 303 aaKnown RBP19.16■□□□□ 0.66
U2AF1-201ENST00000291552 TCTEX1D2Q8WW35 142 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 SNAPC3Q92966 411 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 SPIN2AQ99865 258 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 SPIN2BQ9BPZ2 258 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 YTHDF1Q9BYJ9 559 aaKnown RBP19.16■□□□□ 0.66
U2AF1-201ENST00000291552 MRPS7Q9Y2R9 242 aaKnown RBP19.16■□□□□ 0.66
U2AF1-201ENST00000291552 DMRT1Q9Y5R6 373 aa19.16■□□□□ 0.66
U2AF1-201ENST00000291552 E7EUB6 86 aa19.15■□□□□ 0.66
U2AF1-201ENST00000291552 CREBL2O60519 120 aaPredicted RBP19.15■□□□□ 0.66
U2AF1-201ENST00000291552 KBTBD11O94819 623 aa19.15■□□□□ 0.66
U2AF1-201ENST00000291552 GVQW1Q8N7I0 195 aa19.15■□□□□ 0.66
U2AF1-201ENST00000291552 OR4S2Q8NH73 311 aa19.15■□□□□ 0.66
U2AF1-201ENST00000291552 HSD17B10Q99714 261 aaKnown RBP19.15■□□□□ 0.66
U2AF1-201ENST00000291552 SPATA2Q9UM82 520 aa19.15■□□□□ 0.66
U2AF1-201ENST00000291552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.14■□□□□ 0.65
U2AF1-201ENST00000291552 H0Y980 276 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 ACTL6BO94805 426 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 IL6RP08887 468 aaPredicted RBP19.14■□□□□ 0.65
U2AF1-201ENST00000291552 ATP5G2Q06055 141 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 TMEM167AQ8TBQ9 72 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 CITED4Q96RK1 184 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 TAS2R8Q9NYW2 309 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 DNAH1Q9P2D7 4330 aa19.14■□□□□ 0.65
U2AF1-201ENST00000291552 OR2J3O76001 311 aa19.13■□□□□ 0.65
U2AF1-201ENST00000291552 MFSD4AQ8N468 514 aa19.13■□□□□ 0.65
U2AF1-201ENST00000291552 NECAP1Q8NC96 275 aa19.13■□□□□ 0.65
U2AF1-201ENST00000291552 Q9H521 79 aa19.13■□□□□ 0.65
U2AF1-201ENST00000291552 TRAV18A0A075B6X5 111 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 LCN12Q6JVE5 192 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 Q8N402 240 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms