RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 DYNLRB1Q9NP97 96 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 TMEM140Q9NV12 185 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 KIAA1456Q9P272 454 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 COL6A6A6NMZ7 2263 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 PPIAL4EA0A075B759 164 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 TRAV38-1A0A0B4J264 116 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 ZNF729A6NN14 1252 aaPredicted RBP15.85■□□□□ 0.13
BRAF-201ENST00000288602 PPIAL4DF5H284 164 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 PPIAL4FP0DN26 164 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 HOXA1P49639 335 aaPredicted RBP15.85■□□□□ 0.13
BRAF-201ENST00000288602 TFF3Q07654 80 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 PPIAL4AQ9Y536 164 aa15.85■□□□□ 0.13
BRAF-201ENST00000288602 NCOR2Q9Y618 2525 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 TPRP12270 2363 aaKnown RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 NKX6-3A6NJ46 265 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 IGKV1D-33P01593 117 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 IGKV1-33P01594 117 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 NQO2P16083 231 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 RPL31P62899 125 aaKnown RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 CDSNQ15517 529 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 PSMG3Q9BT73 122 aaPredicted RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 TMEM106BQ9NUM4 274 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 GNG13Q9P2W3 67 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 HMGB3O15347 200 aaKnown RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 RAB2AP61019 212 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 ERVK-16P61578 105 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 ICAM4Q14773 271 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 CLDND2Q8NHS1 167 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 H1FXQ92522 213 aaKnown RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 RCC1LQ96I51 464 aaKnown RBP15.84■□□□□ 0.13
BRAF-201ENST00000288602 NGBQ9NPG2 151 aa15.84■□□□□ 0.13
BRAF-201ENST00000288602 PUS1Q9Y606 427 aaKnown RBP eCLIP15.84■□□□□ 0.13
BRAF-201ENST00000288602 hADV38S2A0JD32 116 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 C15orf62A8K5M9 175 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 RELBQ01201 579 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 DPPA3Q6W0C5 159 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 CIB3Q96Q77 187 aaPredicted RBP15.83■□□□□ 0.12
BRAF-201ENST00000288602 ABCA4P78363 2273 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 A0A1B0GW64 132 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 BTBD17A6NE02 478 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 ZFP92A6NM28 416 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 CCL21O00585 134 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 SCAF4O95104 1147 aaKnown RBP15.83■□□□□ 0.12
BRAF-201ENST00000288602 MYOD1P15172 320 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 FGF7P21781 194 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 SOHLH1Q5JUK2 328 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 ACSM6Q6P461 480 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 ZCCHC14Q8WYQ9 949 aaKnown RBP15.83■□□□□ 0.12
BRAF-201ENST00000288602 CLCC1Q96S66 551 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 RAB9BQ9NP90 201 aa15.83■□□□□ 0.12
BRAF-201ENST00000288602 RPUSD1Q9UJJ7 312 aaKnown RBP15.83■□□□□ 0.12
BRAF-201ENST00000288602 C7orf77A4D0Y5 90 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 ZNF787Q6DD87 383 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 KDF1Q8NAX2 398 aaPredicted RBP15.82■□□□□ 0.12
BRAF-201ENST00000288602 OR4S2Q8NH73 311 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 CORO2AQ92828 525 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 RHOVQ96L33 236 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 TMEM147Q9BVK8 224 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 TACC2O95359 2948 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 VSTM5A8MXK1 200 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 ITGB1BP1O14713 200 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 RBFOX2O43251 390 aaKnown RBP eCLIP15.82■□□□□ 0.12
BRAF-201ENST00000288602 OR8U8P0C7N1 319 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 DEFA4P12838 97 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 SERF2P84101 59 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 TMEM200BQ69YZ2 307 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 ABHD12Q8N2K0 398 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
BRAF-201ENST00000288602 CYB561D1Q8N8Q1 229 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 LINC00312Q9Y6C7 94 aa15.82■□□□□ 0.12
BRAF-201ENST00000288602 IFNA10P01566 189 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 IGKV1-16P04430 117 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 SRP19P09132 144 aaKnown RBP15.81■□□□□ 0.12
BRAF-201ENST00000288602 CA7P43166 264 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 RAB13P51153 203 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 CASP6P55212 293 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 TMEM41BQ5BJD5 291 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 C1orf87Q8N0U7 546 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 ISOC2Q96AB3 205 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 PINX1Q96BK5 328 aaKnown RBP15.81■□□□□ 0.12
BRAF-201ENST00000288602 HEYLQ9NQ87 328 aaPredicted RBP15.81■□□□□ 0.12
BRAF-201ENST00000288602 CTSZQ9UBR2 303 aa15.81■□□□□ 0.12
BRAF-201ENST00000288602 LYNX1G3V0Z9 82 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 RRHO14718 337 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 HBE1P02100 147 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 LYNX1P0DP58 116 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 OR4A47Q6IF82 309 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 SLC25A48Q6ZT89 311 aaKnown RBP15.8■□□□□ 0.12
BRAF-201ENST00000288602 LINC00574Q9H8X3 128 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 GAB2Q9UQC2 676 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 CD3EP07766 207 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 UCNP55089 124 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 SPCS3P61009 180 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 FAM216AQ8WUB2 273 aa15.8■□□□□ 0.12
BRAF-201ENST00000288602 PARD6GQ9BYG4 376 aaPredicted RBP15.8■□□□□ 0.12
BRAF-201ENST00000288602 ANKHD1Q8IWZ3 2542 aaKnown RBP15.8■□□□□ 0.12
BRAF-201ENST00000288602 CT45A6P0DMU7 189 aa15.79■□□□□ 0.12
BRAF-201ENST00000288602 CT45A5P0DMU8 189 aa15.79■□□□□ 0.12
BRAF-201ENST00000288602 CT45A7P0DMV0 189 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms