RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 NUBP1P53384 320 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 GDF15Q99988 308 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 PPIAL4EA0A075B759 164 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 PPIAL4DF5H284 164 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 PPIAL4FP0DN26 164 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 GFI1BQ5VTD9 330 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 MMD2Q8IY49 270 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 TMEM74BQ9NUR3 256 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 LRRC75BQ2VPJ9 315 aa14.08□□□□□ -0.15
SH3RF1-201ENST00000284637 ABHD12Q8N2K0 398 aa14.08□□□□□ -0.15
SH3RF1-201ENST00000284637 PGLYRP4Q96LB8 373 aa14.08□□□□□ -0.15
SH3RF1-201ENST00000284637 COL4A5P29400 1685 aa14.08□□□□□ -0.15
SH3RF1-201ENST00000284637 TDRD6O60522 2096 aaKnown RBP14.08□□□□□ -0.15
SH3RF1-201ENST00000284637 KIR2DL2P43627 348 aaPredicted RBP14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 AMBPP02760 352 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 GCSHP23434 173 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 ST6GALNAC3Q8NDV1 305 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 ZNF502Q8TBZ5 544 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 POLR2AP24928 1970 aaKnown RBP14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 FAM90A26D6RGX4 464 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 ASPHD2Q6ICH7 369 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 VKORC1L1Q8N0U8 176 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 LEAP2Q969E1 77 aa14.08□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 IFI6P09912 130 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 RND2P52198 227 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM45BQ96B21 275 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 RCC1LQ96I51 464 aaKnown RBP14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 EAF1Q96JC9 268 aaPredicted RBP14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 IGHV2-70P01814 119 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 TFPI2P48307 235 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 KCNMB1Q16558 191 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 SLC25A45Q8N413 288 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 CLDND2Q8NHS1 167 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 ZNF714Q96N38 554 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 HSPB7Q9UBY9 170 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 FOXD3Q9UJU5 478 aaPredicted RBP14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 ITLN1Q8WWA0 313 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 RABAC1Q9UI14 185 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 MYOFQ9NZM1 2061 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 M0R3E3 92 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 ESPL1Q14674 2120 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 RBPMS2Q6ZRY4 209 aaKnown RBP14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 FAM214BQ7L5A3 538 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 WFDC3Q8IUB2 231 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM70Q9BUB7 260 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 WNT5BQ9H1J7 359 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 NEUROG3Q9Y4Z2 214 aa14.07□□□□□ -0.16
SH3RF1-201ENST00000284637 C16orf97H3BN30 126 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 H3BTX0 84 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 RELQ04864 619 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 C1orf194Q5T5A4 169 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 SRXN1Q9BYN0 137 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 PRDM13Q9H4Q3 707 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 ODAMA1E959 279 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 CKS2P33552 79 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 SELENOTP62341 195 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM177Q53S58 311 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 NEU1Q99519 415 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 SCNM1Q9BWG6 230 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 UCP3P55916 312 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 IGKV1D-43A0A0B4J1Z2 117 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 CRXO43186 299 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 SSBP3Q9BWW4 388 aaPredicted RBP14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 PKIBQ9C010 78 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 HS3ST3B1Q9Y662 390 aa14.06□□□□□ -0.16
SH3RF1-201ENST00000284637 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 H0YIZ8 118 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 HSPE1P61604 102 aaKnown RBP14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 SPSB4Q96A44 273 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 SDK2Q58EX2 2172 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 IGHV3-48P01763 117 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 DRAM1Q8N682 238 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 ZNF831Q5JPB2 1677 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM238LA0A1B0GVL6 79 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 A6NJY4 79 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 TNFSF13O75888 250 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 P2RY6Q15077 328 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 TMEM136Q6ZRR5 245 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 HILPDAQ9Y5L2 63 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 OR1N2Q8NGR9 330 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 LSM10Q969L4 123 aaKnown RBP14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 DERL1Q9BUN8 251 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
SH3RF1-201ENST00000284637 WNK3Q9BYP7 1800 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 C8orf88P0DMB2 117 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 IGLV3-21P80748 117 aaPredicted RBP14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 TCF19Q9Y242 345 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 SPAARA0A1B0GVQ0 90 aa14.04□□□□□ -0.16
SH3RF1-201ENST00000284637 DLL1O00548 723 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms