RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 MFSD4AQ8N468 514 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 S100A16Q96FQ6 103 aaKnown RBP11.12□□□□□ -0.63
HMGN3-201ENST00000275036 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
HMGN3-201ENST00000275036 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 NAA50Q9GZZ1 169 aaKnown RBP11.12□□□□□ -0.63
HMGN3-201ENST00000275036 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 ZNF430Q9H8G1 570 aaPredicted RBP11.12□□□□□ -0.63
HMGN3-201ENST00000275036 CCL28Q9NRJ3 127 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
HMGN3-201ENST00000275036 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 OVOL1O14753 267 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 TNFSF12O43508 249 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
HMGN3-201ENST00000275036 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
HMGN3-201ENST00000275036 CDK10Q15131 360 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 TNXAQ16473 311 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 TMEM69Q5SWH9 247 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 OR5AP2Q8NGF4 316 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
HMGN3-201ENST00000275036 DCUN1D5Q9BTE7 237 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 ZNF355PQ9NSJ1 428 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
HMGN3-201ENST00000275036 H3BUA1 57 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 CD40LGP29965 261 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 ECI1P42126 302 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 CBX5P45973 191 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 ZNF66Q6ZN08 573 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 ACOT12Q8WYK0 555 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
HMGN3-201ENST00000275036 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 TINAGL1Q9GZM7 467 aaPredicted RBP11.1□□□□□ -0.63
HMGN3-201ENST00000275036 COMMD3Q9UBI1 195 aa11.1□□□□□ -0.63
HMGN3-201ENST00000275036 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
HMGN3-201ENST00000275036 RAMP3O60896 148 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 BRI3O95415 125 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
HMGN3-201ENST00000275036 RFX2P48378 723 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 FXYD4P59646 89 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 CD69Q07108 199 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 MSMO1Q15800 293 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 CTF1Q16619 201 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 ZNF818PQ6ZRF7 136 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 PUSL1Q8N0Z8 303 aaKnown RBP11.09□□□□□ -0.63
HMGN3-201ENST00000275036 ADAD2Q8NCV1 583 aaKnown RBP11.09□□□□□ -0.63
HMGN3-201ENST00000275036 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 PHB2Q99623 299 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 IFT46Q9NQC8 304 aa11.09□□□□□ -0.63
HMGN3-201ENST00000275036 A0A1B0GW64 132 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 E7EUB6 86 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 NAT1P18440 290 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 ANKRD13BQ86YJ7 626 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 MMD2Q8IY49 270 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
HMGN3-201ENST00000275036 C13orf42A0A1B0GVH6 325 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 SULT1C2O00338 296 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 SAP30O75446 220 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 KBTBD11O94819 623 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 OR2A4O95047 310 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 GABARAPO95166 117 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 APOA1P02647 267 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 PMP2P02689 132 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 PRH1P02810 166 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 OR9G9P0C7N8 305 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ELK1P19419 428 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 PRSS3P35030 304 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 INSL3P51460 131 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF45Q02386 682 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ACSM6Q6P461 480 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 TMEM167AQ8TBQ9 72 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 OR2A7Q96R45 310 aa11.07□□□□□ -0.64
HMGN3-201ENST00000275036 ZMAT5Q9UDW3 170 aaKnown RBP11.07□□□□□ -0.64
HMGN3-201ENST00000275036 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 HPGDSO60760 199 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 ACTL6BO94805 426 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-201ENST00000275036 MYOD1P15172 320 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 GNRHRP30968 328 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
HMGN3-201ENST00000275036 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms