RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 SYT8Q8NBV8 401 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
SMG9-201ENST00000270066 H0YL77 283 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 CD99P14209 185 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 CLDN18P56856 261 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 ATRAIDQ6UW56 229 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 MRPL37Q9BZE1 423 aaKnown RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 LINC00587B1AMM8 73 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 IGHV1-2P23083 117 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 TFPI2P48307 235 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 UNC119Q13432 240 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 FLVCR1-AS1Q8TAF5 88 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 SSBP3Q9BWW4 388 aaPredicted RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
SMG9-201ENST00000270066 KBTBD11O94819 623 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 MELTFP08582 738 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 S1PR2O95136 353 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 APCSP02743 223 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 CD59P13987 128 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 ZNF137PP52743 207 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 PQLC2Q6ZP29 291 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 RTN4RL2Q86UN3 420 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
SMG9-201ENST00000270066 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
SMG9-201ENST00000270066 LHX2P50458 406 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 ASPHD2Q6ICH7 369 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 LRRC75AQ8NAA5 344 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 CD74P04233 296 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 AREGP15514 252 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 WDR25Q64LD2 544 aaPredicted RBP11.29□□□□□ -0.6
SMG9-201ENST00000270066 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMG9-201ENST00000270066 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 RHBDL1O75783 438 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 TCTAP57738 103 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
SMG9-201ENST00000270066 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 FXYD3Q14802 87 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
SMG9-201ENST00000270066 TMSB15BA0A087X1C1 80 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 A0A0B4J293 547 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 RNF224P0DH78 156 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 CRYBA2P53672 197 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 RARRES2Q99969 163 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 PDCD11Q14690 1871 aaKnown RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 DRAM1Q8N682 238 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 FAM168AQ92567 244 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 A8MWL6 223 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 IQCF6A8MYZ5 107 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 SSTR5P35346 364 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 ZNRF1Q8ND25 227 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 K7ERU9 68 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 HKR1P10072 659 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 FAM3BP58499 235 aaPredicted RBP11.28□□□□□ -0.6
SMG9-201ENST00000270066 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
SMG9-201ENST00000270066 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms