RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 VKORC1L1Q8N0U8 176 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 OR11H6Q8NGC7 330 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 OR13D1Q8NGV5 346 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 C10orf105Q8TEF2 133 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 UNKLQ9H9P5 680 aaKnown RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 LY6LH3BQJ8 138 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 JTBO76095 146 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 REG1BP48304 166 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 BAXQ07812 192 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 SLC7A5P1Q8MH63 180 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 CACFD1Q9UGQ2 172 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 IAPPP10997 89 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 PLA2G2AP14555 144 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 COX7A1P24310 79 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 ATP5J2P56134 94 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 OR4A47Q6IF82 309 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 HCP5Q6MZN7 132 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 ZNF429Q86V71 674 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 PNKDQ8N490 385 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 UBAC2Q8NBM4 344 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 FAM168AQ92567 244 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 PIMREGQ9BSJ6 248 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
TPM1-201ENST00000267996 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 PSENENQ9NZ42 101 aa13.27□□□□□ -0.29
TPM1-201ENST00000267996 POLR3KQ9Y2Y1 108 aaPredicted RBP13.27□□□□□ -0.29
TPM1-201ENST00000267996 AMMECR1Q9Y4X0 333 aaPredicted RBP13.27□□□□□ -0.29
TPM1-201ENST00000267996 MED13LQ71F56 2210 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 TRAV3A0A0B4J244 114 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 SRRM4A7MD48 611 aaKnown RBP13.26□□□□□ -0.29
TPM1-201ENST00000267996 MC5RP33032 325 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 PRB3Q04118 309 aaPredicted RBP13.26□□□□□ -0.29
TPM1-201ENST00000267996 OR4A16Q8NH70 328 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 LHX4Q969G2 390 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
TPM1-201ENST00000267996 UTP20O75691 2785 aaKnown RBP13.26□□□□□ -0.29
TPM1-201ENST00000267996 USP9YO00507 2555 aaPredicted RBP13.26□□□□□ -0.29
TPM1-201ENST00000267996 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 LINC00862A6NCI5 91 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 RAB13P51153 203 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 OR2B8PP59922 312 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 SPCS3P61009 180 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 RAB14P61106 215 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 STPG2Q8N412 459 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 SIRPDQ9H106 197 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 BET1LQ9NYM9 111 aa13.25□□□□□ -0.29
TPM1-201ENST00000267996 FOXA2Q9Y261 457 aaPredicted RBP13.25□□□□□ -0.29
TPM1-201ENST00000267996 ODF3BA8MYP8 253 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 H3BP45 60 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 H7C2Y5 167 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
TPM1-201ENST00000267996 FOXH1O75593 365 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 CST7O76096 145 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 LY86O95711 162 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 NMBP08949 121 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 SULT1A1P50225 295 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 LCN2P80188 198 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
TPM1-201ENST00000267996 OR4C13Q8NGP0 309 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 DTD1Q8TEA8 209 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
TPM1-201ENST00000267996 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
TPM1-201ENST00000267996 CIB3Q96Q77 187 aaPredicted RBP13.24□□□□□ -0.29
TPM1-201ENST00000267996 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 SIRT7Q9NRC8 400 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 UPK2O00526 184 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 SHOXO15266 292 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 DYNLT3P51808 116 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 LDLRAD2Q5SZI1 272 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 STX12Q86Y82 276 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 NRGNQ92686 78 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 ZDHHC16Q969W1 377 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 HARBI1Q96MB7 349 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 MMP26Q9NRE1 261 aa13.24□□□□□ -0.29
TPM1-201ENST00000267996 IGHV1-3A0A0C4DH29 117 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 IGHV4-61A0A0C4DH41 118 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 J3QKU1 62 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 DSCR9P59020 149 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 HAPLN4Q86UW8 402 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
TPM1-201ENST00000267996 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
TPM1-201ENST00000267996 PRNDQ9UKY0 176 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms