RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FAM24BQ8N5W8 94 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 ZNF383Q8NA42 475 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
MSH3-201ENST00000265081 PUS1Q9Y606 427 aaKnown RBP eCLIP9.16□□□□□ -0.94
MSH3-201ENST00000265081 DSPP15924 2871 aaKnown RBP9.16□□□□□ -0.94
MSH3-201ENST00000265081 CUL9Q8IWT3 2517 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 IFNA1P01562 189 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 ERVFRD-1P60508 538 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
MSH3-201ENST00000265081 CTDSP1Q9GZU7 261 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
MSH3-201ENST00000265081 A0A1B0GV50 99 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 hCG_1809904A0A1W2PP81 198 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 A0A1W2PR64 198 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 A0A1W2PRV1 198 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 SMCO3A2RU48 225 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 DPRXA6NFQ7 191 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 KLK10O43240 276 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 FCGR3BO75015 233 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.94
MSH3-201ENST00000265081 OR8G2PQ6IF36 304 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 A0A087X0M5 115 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 A0A1B0GX30 115 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 ZNF98A6NK75 572 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 MKRN2OSH3BPM6 223 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 TLE1Q04724 770 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 RBMS3Q6XE24 437 aaKnown RBP9.15□□□□□ -0.94
MSH3-201ENST00000265081 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
MSH3-201ENST00000265081 M0R1X1 148 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 YIF1AO95070 293 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 CXCL1P09341 107 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 SELLP14151 372 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 CD1BP29016 333 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 ZNF137PP52743 207 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 SLC25A24Q6NUK1 477 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 DMRTC2Q8IXT2 367 aaPredicted RBP9.15□□□□□ -0.94
MSH3-201ENST00000265081 OR10G9Q8NGN4 311 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 OR10G7Q8NGN6 311 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 GNG12Q9UBI6 72 aa9.15□□□□□ -0.94
MSH3-201ENST00000265081 TRBV24-1A0A075B6N3 115 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 TRGV10A0A0A0MS01 117 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 C17orf100A8MU93 164 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 KBTBD11O94819 623 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 DLX6P56179 175 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 LINC00311Q8N616 119 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 S1PR3Q99500 378 aa9.15□□□□□ -0.95
MSH3-201ENST00000265081 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 C16orf97H3BN30 126 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
MSH3-201ENST00000265081 FGF8P55075 233 aaPredicted RBP9.14□□□□□ -0.95
MSH3-201ENST00000265081 ATP5IP56385 69 aaPredicted RBP9.14□□□□□ -0.95
MSH3-201ENST00000265081 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
MSH3-201ENST00000265081 TP53TG5Q9Y2B4 290 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 C1QTNF9P0C862 333 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 TNFSF4P23510 183 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 FFAR4Q5NUL3 377 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 C2CD4CQ8TF44 421 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 MGST2Q99735 147 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 KAAG1Q9UBP8 84 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 K7ENP7 123 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 CT45A6P0DMU7 189 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 CT45A5P0DMU8 189 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 CT45A7P0DMV0 189 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 PSMB3P49720 205 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 TBR1Q16650 682 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 OR4A47Q6IF82 309 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 ZFP82Q8N141 532 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 NEUROG1Q92886 237 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 NAT8Q9UHE5 227 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
MSH3-201ENST00000265081 CEBPZOSA8MTT3 80 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 TMPRSS2O15393 492 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 S100A8P05109 93 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 BET1LQ9NYM9 111 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 ZNF727A8MUV8 499 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 RRHO14718 337 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 OR2B8PP59922 312 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
MSH3-201ENST00000265081 PVRIGQ6DKI7 326 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 LHX4Q969G2 390 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 RAB24Q969Q5 203 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 GGTLC1Q9BX51 225 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 TMEM178BH3BS89 294 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 TGOLN2O43493 480 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 MMP23AO75900 390 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 VENTXO95231 258 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 SMIM6P0DI80 62 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 MEOX2P50222 304 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 ELLP55199 621 aaPredicted RBP9.13□□□□□ -0.95
MSH3-201ENST00000265081 SELENOVP59797 346 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 SNRPEP62304 92 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms