RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Epha8O09127 1004 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gfra3O35118 397 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gosr1O88630 250 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Rps4xP62702 263 aaKnown RBP11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ctf2P83714 204 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Lrrc26Q91W20 331 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Cml1Q9JIZ0 222 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 NpffQ9WVA8 114 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Bcl2l10Q9Z0F3 191 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Scn4aQ9ER60 1841 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Esp38A8R0X1 80 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr609E9Q4X7 319 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Dus4lQ32M08 324 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 NmsQ5H8A1 153 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Syt11Q9R0N3 430 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Igkv1-131A0A140T8M8 120 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr1537P34983 314 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Efnb2P52800 336 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Harbi1Q8BR93 349 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Mfsd4b1Q8VCV9 425 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Tnk1Q99ML2 666 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Vmn1r63Q9EPT1 300 aa11.33□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm45800A0A1B0GT24 152 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Zfp931A2AHM2 298 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr898L7N1Z5 316 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Sh2d1bO35324 132 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ifna4P07351 186 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 GcsamQ6RFH4 181 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Cmc2Q8K199 79 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr1230Q8VG58 305 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ank1Q02357 1862 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Nup205A0A0J9YUD5 2061 aaKnown RBP11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Trav12n-2A0A075B626 113 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Vma21-psA0A140T8R2 101 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Lrrc29A0A1B0GQY9 621 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Lgals9O08573 353 aaKnown RBP11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Bmpr1bP36898 502 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr5Q60889 312 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 CtsoQ8BM88 312 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr943Q9EQ92 314 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Il18bpQ9Z0M9 193 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ighv7-1A0A075B5S2 121 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm29776A0A286YEC0 699 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 GastP48757 101 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Spam1P48794 512 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr1462Q8VFW3 307 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Mgst1Q91VS7 155 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 TriobpQ99KW3 2014 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Tmem262D3Z338 116 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 St8sia5P70126 412 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Dleu7Q8CHZ8 209 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ly6fP35460 134 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 P2ry1P49650 373 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Fam78bQ8BQN5 261 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr186Q8VEX5 309 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr50Q8VGK5 312 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Zfp958Q99LG7 467 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Marveld3Q9D956 376 aa11.32□□□□□ -0.6
Gm28043-201ENSMUST00000130871 TspoP50637 169 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Cks1brtQ3UNC9 96 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Asphd2Q80VP9 343 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Vmn1r202Q8R259 302 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Commd5Q8R395 224 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Klf9O35739 244 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 H2-LP01897 362 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Cnr1P47746 473 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ucp3P56501 308 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Cxxc4Q6NXI8 198 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Prss3Q792Z0 246 aaKnown RBP11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Tmem251Q8BH26 163 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Rtn4rl1Q8K0S5 445 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr1446Q8VFX4 308 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr1262Q8VGN2 304 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Sf3b5Q923D4 86 aaKnown RBP11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Tmem107Q9CPV0 140 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Tnfrsf12aQ9CR75 129 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Rcc1lQ9CYF5 461 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Hdhd3Q9CYW4 251 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Plp2Q9R1Q7 152 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm29049A0A087WSM5 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm15293D3YX02 93 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm21118J3QPK8 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Rab33bO35963 229 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Wnt1P04426 370 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20909Q5FWB5 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20852Q5M8R5 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Rtp3Q5QGU6 474 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20917Q62457 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20809Q62458 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20865Q62460 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20738Q810R8 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Olfr124Q8VGW6 315 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gm20806Q9D9T3 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Znf511Q6P0X2 227 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Gpr135Q7TQP2 457 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Sval2Q99N75 144 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Mrpl42Q9CPV3 142 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Slc2a8Q9JIF3 477 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Zfp142G5E869 1843 aa11.31□□□□□ -0.6
Gm28043-201ENSMUST00000130871 Ecm29Q6PDI5 1840 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms