RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tmprss11fQ8BHM9 439 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Fam25cQ8CF02 89 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cavin3Q91VJ2 260 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 SrpxQ9R0M3 464 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm17655A0A1B0GT13 591 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm9920D3YVZ2 140 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr419E9Q0Y7 313 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Csf3P09920 208 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Mdga2P60755 949 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rac2Q05144 192 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Zic4Q61467 341 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 H2-M10.4Q85ZW8 331 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Ssmem1Q9D9Y8 244 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Zfand6Q9DCH6 223 aa13.5□□□□□ -0.25
Trim39-203ENSMUST00000113706 Igkv4-50A0A0B4J1J0 117 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm45808A0A1B0GSH8 263 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 KantrA0A1W2P7I0 76 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 1700031F05RikB1AX30 191 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cdhr4H3BJZ2 783 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Agr2O88312 175 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 AregP31955 248 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gal3st2cQ3ULK5 396 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Lrrc30Q3UV48 300 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Ifna15Q61718 190 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Irak1bp1Q9ESJ7 259 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Hs3st3b1Q9QZS6 390 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Ube2dnl1A2AFH1 155 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rd3lB2RV38 197 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 4930467E23RikD3Z1P8 350 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm15319E9Q637 350 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 AhsgP29699 345 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm1673Q3UR78 90 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rtp3Q5QGU6 474 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Lcn3Q62471 182 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Smim12Q78RX3 92 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Galnt14Q8BVG5 550 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 RhofQ8BYP3 211 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 CenpxQ8C4X1 78 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm21119Q8C646 350 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Nhlrc3Q8CCH2 347 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Cuedc1Q8R3V6 388 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Hils1Q9QYL0 170 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rab25Q9WTL2 213 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 SpdefQ9WTP3 325 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm20918J3QN17 227 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Evx1P23683 416 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Slc17a5Q8BN82 495 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr490Q8VFD2 314 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Fgf16Q9ESL8 207 aa13.49□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rab3dP35276 219 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Apobec4Q497M3 374 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Trav6-2Q5R1I4 113 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Kat7Q5SVQ0 613 aaKnown RBP13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rbm48Q8K2X2 371 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr360Q8VFP3 317 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Dyrk3Q922Y0 586 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 2900055J20RikQ9D6G3 140 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Naa60Q9DBU2 242 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Fbln5Q9WVH9 448 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr936J3KMV2 267 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Serf1O88892 62 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Sdc1P18828 311 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Htr2bQ02152 479 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Klk1b24Q61754 263 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 LaynQ8C351 381 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Q8CDS7 251 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Fyttd1Q91Z49 317 aaKnown RBP13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Myoz1Q9JK37 296 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Fzr1Q9R1K5 493 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Zfp292Q9Z2U2 2698 aa13.48□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr69E9Q7C5 316 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 PhyhO35386 338 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr1240Q8VG73 314 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Memo1Q91VH6 297 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr116Q923Q6 321 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Xcr1Q9R0M1 322 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm2026A2ART4 498 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Rbm24D3Z4I3 236 aaKnown RBP13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 P01660 111 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Zfp58P16372 489 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 TspoP50637 169 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Spatc1Q148B6 480 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 AbraclQ4KML4 81 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Hs3st6Q5GFD5 342 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Epha5Q60629 876 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Slc46a1Q6PEM8 459 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr279Q8VFD8 310 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Q8WUR0 141 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Samt4Q9D4X6 233 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm15440D3Z3P4 90 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Vmn2r83E9Q0G7 864 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Vmn1r129E9QA94 307 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm21788J3QNH3 180 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm8720K9J7F4 307 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm3633L7N233 213 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm9611L7N476 213 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gfi1bO70237 330 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Mpv17P19258 176 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Tmem71Q149F5 287 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Nr2c2apQ3TV70 140 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms