RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Nkx6-1Q99MA9 365 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Xrcc3Q9CXE6 349 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Q9DAF8 208 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Herpud1Q9JJK5 391 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Tnfrsf19Q9JLL3 416 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Gabrg1Q9R0Y8 465 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Vax2Q9WTP9 292 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 KalrnA2CG49 2964 aa10.46□□□□□ -0.73
Ufd1-201ENSMUST00000005394 Ighv8-2A0A0A6YW58 119 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Igkv4-63A0A0G2JFU6 117 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gm45800A0A1B0GT24 152 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rbm24D3Z4I3 236 aaKnown RBP10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Aqp7O54794 303 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gpr27O54897 379 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 P06335 190 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Csf3P09920 208 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Zfp36l1P23950 338 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Isoc2aP85094 206 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mbd6Q3TY92 1003 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Svs6Q64356 99 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr1341Q7TQV4 312 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr923Q7TRB9 317 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Lhfpl1Q80SV1 220 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Nanos1Q80WY3 267 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 AtcayQ8BHE3 372 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rspo4Q8BJ73 228 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Dctn4Q8CBY8 467 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Tmem56Q8CGF5 276 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mus81Q91ZJ0 551 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Q9CQT9 129 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Dtwd2Q9D0U1 298 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 MrnipQ9D1F5 335 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Cldn23Q9D7D7 296 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Hspb9Q9DAM3 168 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Angpt4Q9WVH6 509 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 FrylF8VQ05 3007 aa10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Arid1aA2BH40 2283 aaKnown RBP10.46□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rpl23a-ps3A0A140T8M7 156 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gm17333C6EQI3 125 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Trav13d-3J3QMG8 112 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 DdtO35215 118 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Wnt1P04426 370 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 CapzbP47757 277 aaKnown RBP10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Nkx2-1P50220 372 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Klf16P58334 251 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rpl23aP62751 156 aaKnown RBP10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Nr2c2apQ3TV70 140 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 AbraclQ4KML4 81 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Tmprss13Q5U405 543 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Oas1bQ60856 376 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Lrtm2Q8BGX3 370 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr112Q8C0S2 320 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rnf170Q8CBG9 286 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Depp1Q8K2F3 205 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr1447Q8VFX3 309 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr1201Q8VGF5 307 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr1257Q8VGP0 309 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr974Q8VH09 310 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 MrgprgQ91ZB5 289 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Tbx19Q99ME7 446 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mpv17lQ99MS3 194 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Emc6Q9CQW0 110 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rpusd4Q9CWX4 377 aaKnown RBP10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Pdzd11Q9CZG9 140 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mrpl13Q9D1P0 178 aaKnown RBP10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rnase6Q9D244 153 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Vmn1r54Q9EPB8 315 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Fbxl17Q9QZN1 701 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Lrp4Q8VI56 1905 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Notch4P31695 1964 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Trav23A0A0G2JG17 115 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 E030025P04RikA2A6V5 185 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gm12790B1AUV6 201 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr773F6VS78 311 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rac1P63001 192 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Slc22a14Q497L9 629 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rasl2-9Q61820 216 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr782Q7TRI2 314 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 IdnkQ8R0J8 184 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr52Q8VFL0 319 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr1141Q8VFQ7 311 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Olfr772Q8VGC5 311 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Abhd3Q91ZH7 411 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mgat2Q921V5 442 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gdpd3Q99LY2 330 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rpp14Q9CQH8 122 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Q9CQM1 111 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Tomm40lQ9CZR3 308 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Cyc1Q9D0M3 325 aaKnown RBP10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Aaed1Q9D1A0 226 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Spsb1Q9D5L7 273 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Vmn1r41Q9EQ44 310 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Prg4Q9JM99 1054 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Dnase2bQ9QY48 354 aa10.45□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rai1Q61818 1889 aa10.44□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Gm3285A0A1W2P7U0 201 aa10.44□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Mn1D3YWE6 1297 aa10.44□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Rdh16f1E9Q9P8 317 aa10.44□□□□□ -0.74
Ufd1-201ENSMUST00000005394 IfnabL7MTU6 190 aa10.44□□□□□ -0.74
Ufd1-201ENSMUST00000005394 Klk1b3P00756 261 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 252.1 ms