RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	THR1	P17423	357 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	TEC1	P18412	486 aa		4.99	□□□□□ -1.61
snR17b	snR17b	PRE8	P23639	250 aa		4.99	□□□□□ -1.61
snR17b	snR17b	DAL2	P25335	343 aa		4.99	□□□□□ -1.61
snR17b	snR17b	IRE1	P32361	1115 aa		4.99	□□□□□ -1.61
snR17b	snR17b	TFC1	P32367	649 aa		4.99	□□□□□ -1.61
snR17b	snR17b	PEP12	P32854	288 aa		4.99	□□□□□ -1.61
snR17b	snR17b	RPT5	P33297	434 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	CSE1	P33307	960 aa		4.99	□□□□□ -1.61
snR17b	snR17b	TPO5	P36029	618 aa		4.99	□□□□□ -1.61
snR17b	snR17b	APE4	P38821	490 aa		4.99	□□□□□ -1.61
snR17b	snR17b	NDT80	P38830	627 aa		4.99	□□□□□ -1.61
snR17b	snR17b	PMC1	P38929	1173 aa	Predicted RBP	4.99	□□□□□ -1.61
snR17b	snR17b	PES4	P39684	611 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SAH1	P39954	449 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	RIC1	P40395	1056 aa		4.99	□□□□□ -1.61
snR17b	snR17b	AIM21	P40563	679 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SBE2	P42223	864 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	FAR3	P46671	204 aa		4.99	□□□□□ -1.61
snR17b	snR17b	MAD3	P47074	515 aa		4.99	□□□□□ -1.61
snR17b	snR17b	IMD4	P50094	524 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	COG2	P53271	262 aa		4.99	□□□□□ -1.61
snR17b	snR17b	APP1	P53933	587 aa		4.99	□□□□□ -1.61
snR17b	snR17b	ORC4	P54791	529 aa		4.99	□□□□□ -1.61
snR17b	snR17b	RPA49	Q01080	415 aa	Predicted RBP	4.99	□□□□□ -1.61
snR17b	snR17b	CIK1	Q01649	594 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SRL4	Q03085	281 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SND1	Q04007	877 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SMP3	Q04174	516 aa		4.99	□□□□□ -1.61
snR17b	snR17b	SKG3	Q06315	1026 aa		4.99	□□□□□ -1.61
snR17b	snR17b	ATG26	Q06321	1198 aa		4.99	□□□□□ -1.61
snR17b	snR17b	YET3	Q07451	203 aa		4.99	□□□□□ -1.61
snR17b	snR17b	LAM6	Q08001	693 aa		4.99	□□□□□ -1.61
snR17b	snR17b	NOP12	Q08208	459 aa	Known RBP	4.99	□□□□□ -1.61
snR17b	snR17b	YDR018C	Q12185	396 aa		4.99	□□□□□ -1.61
snR17b	snR17b	NTO1	Q12311	748 aa		4.99	□□□□□ -1.61
snR17b	snR17b	GPR1	Q12361	961 aa		4.99	□□□□□ -1.61
snR17b	snR17b	ATG11	Q12527	1178 aa		4.99	□□□□□ -1.61
snR17b	snR17b	FLO11	P08640	1367 aa		4.99	□□□□□ -1.61
snR17b	snR17b	RIM15	P43565	1770 aa		4.99	□□□□□ -1.61
snR17b	snR17b	TEF1	P02994	458 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	SRD1	P09007	221 aa		4.98	□□□□□ -1.61
snR17b	snR17b	ADP1	P25371	1049 aa		4.98	□□□□□ -1.61
snR17b	snR17b	RPS5	P26783	225 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	URA7	P28274	579 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	MRX3	P38172	270 aa		4.98	□□□□□ -1.61
snR17b	snR17b	YBR138C	P38277	524 aa		4.98	□□□□□ -1.61
snR17b	snR17b	PCA1	P38360	1216 aa		4.98	□□□□□ -1.61
snR17b	snR17b	ERC1	P38767	581 aa		4.98	□□□□□ -1.61
snR17b	snR17b	GGA2	P38817	585 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	SSP120	P39931	234 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	RPN3	P40016	523 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	SNL1	P40548	159 aa		4.98	□□□□□ -1.61
snR17b	snR17b	CHS6	P40955	746 aa		4.98	□□□□□ -1.61
snR17b	snR17b	SAD1	P43589	448 aa		4.98	□□□□□ -1.61
snR17b	snR17b	NUP84	P52891	726 aa		4.98	□□□□□ -1.61
snR17b	snR17b	LSB1	P53281	241 aa		4.98	□□□□□ -1.61
snR17b	snR17b	PUS6	P53294	404 aa		4.98	□□□□□ -1.61
snR17b	snR17b	DSL1	P53847	754 aa		4.98	□□□□□ -1.61
snR17b	snR17b	ADE12	P80210	433 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	SKI8	Q02793	397 aa	Predicted RBP	4.98	□□□□□ -1.61
snR17b	snR17b	OYE2	Q03558	400 aa	Known RBP	4.98	□□□□□ -1.61
snR17b	snR17b	YDR239C	Q03780	787 aa		4.98	□□□□□ -1.61
snR17b	snR17b	SAS4	Q04003	481 aa		4.98	□□□□□ -1.61
snR17b	snR17b	RAD30	Q04049	632 aa		4.98	□□□□□ -1.61
snR17b	snR17b	GPI17	Q04080	534 aa		4.98	□□□□□ -1.61
snR17b	snR17b	PRM6	Q04705	352 aa		4.98	□□□□□ -1.61
snR17b	snR17b	IVY1	Q04934	453 aa		4.98	□□□□□ -1.61
snR17b	snR17b	FMP42	Q04991	504 aa		4.98	□□□□□ -1.61
snR17b	snR17b	CUR1	Q06469	252 aa		4.98	□□□□□ -1.61
snR17b	snR17b	MCM21	Q06675	368 aa		4.98	□□□□□ -1.61
snR17b	snR17b	MCH5	Q08777	521 aa		4.98	□□□□□ -1.61
snR17b	snR17b	YIG1	Q08956	461 aa		4.98	□□□□□ -1.61
snR17b	snR17b	STB3	Q12427	513 aa		4.98	□□□□□ -1.61
snR17b	snR17b	VCX1	Q99385	411 aa		4.98	□□□□□ -1.61
snR17b	snR17b	TY1B-A	O13527	1196 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	ATP2	P00830	511 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	BI2	P03873	423 aa		4.97	□□□□□ -1.61
snR17b	snR17b	BI4	P03879	638 aa		4.97	□□□□□ -1.61
snR17b	snR17b	HEM1	P09950	548 aa	Predicted RBP	4.97	□□□□□ -1.61
snR17b	snR17b	TIF1	P10081	395 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	GCN3	P14741	305 aa		4.97	□□□□□ -1.61
snR17b	snR17b	POL30	P15873	258 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	PRP6	P19735	899 aa	Predicted RBP	4.97	□□□□□ -1.61
snR17b	snR17b	PRP22	P24384	1145 aa	Known RBP	4.97	□□□□□ -1.61
snR17b	snR17b	CDC20	P26309	610 aa		4.97	□□□□□ -1.61
snR17b	snR17b	SPR1	P32603	445 aa		4.97	□□□□□ -1.61
snR17b	snR17b	AFG2	P32794	780 aa		4.97	□□□□□ -1.61
snR17b	snR17b	GYP6	P32806	458 aa		4.97	□□□□□ -1.61
snR17b	snR17b	PET112	P33893	541 aa		4.97	□□□□□ -1.61
snR17b	snR17b	CSG2	P35206	410 aa		4.97	□□□□□ -1.61
snR17b	snR17b	CTP1	P38152	299 aa		4.97	□□□□□ -1.61
snR17b	snR17b	YBL036C	P38197	257 aa		4.97	□□□□□ -1.61
snR17b	snR17b	VMA22	P38784	181 aa		4.97	□□□□□ -1.61
snR17b	snR17b	UBP7	P40453	1071 aa		4.97	□□□□□ -1.61
snR17b	snR17b	GSM1	P42950	618 aa		4.97	□□□□□ -1.61
snR17b	snR17b	YGL176C	P46945	554 aa		4.97	□□□□□ -1.61
snR17b	snR17b	PHO86	P46956	311 aa		4.97	□□□□□ -1.61
snR17b	snR17b	ALY2	P47029	1046 aa		4.97	□□□□□ -1.61
snR17b	snR17b	YJL045W	P47052	634 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms