RNA–Protein interactions for RNA: YPL248C

GAL4, Transcript of DNA-binding transcription factor required for activating GAL genes, yeast

Gene GAL4, Length 2,646 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAL4	YPL248C	APA2	P22108	325 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	CMK1	P27466	446 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	RPL8B	P29453	256 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	SFP1	P32432	683 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	SSE1	P32589	693 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	NUP133	P36161	1157 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	FKH1	P40466	484 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	MND2	P40577	368 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	ZIP2	P53061	704 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	YGR053C	P53234	283 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	SNF12	P53628	566 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	ARE2	P53629	642 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	YNR061C	P53747	219 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	CWC24	P53769	259 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	URC2	Q04411	772 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	ENV9	Q08651	330 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	MDY2	Q12285	212 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	GIS3	Q12418	502 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	CDC16	P09798	840 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	GFA1	P14742	717 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	ISY1	P21374	235 aa	Predicted RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	BAS1	P22035	811 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	SPB1	P25582	841 aa	Predicted RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	MGM1	P32266	881 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	GYP6	P32806	458 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	TYS1	P36421	394 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	DSS1	P39112	969 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	PHB1	P40961	287 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	MNN11	P46985	422 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	MON1	P53129	644 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	YGR054W	P53235	642 aa	Known RBP	4.91	□□□□□ -1.62
GAL4	YPL248C	REG1	Q00816	1014 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	YMR155W	Q03795	547 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	VPS36	Q06696	566 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	GUP2	Q08929	609 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	TAH18	Q12181	623 aa		4.91	□□□□□ -1.62
GAL4	YPL248C	RAD9	P14737	1309 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	HIS3	P06633	220 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	SMI1	P32566	505 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	YPT52	P36018	234 aa	Known RBP	4.9	□□□□□ -1.62
GAL4	YPL248C	VPS51	P36116	164 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	ERT1	P38140	529 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	FLC2	P39719	783 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	MRX1	P40050	688 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	SPO22	P40511	975 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	VPS53	P47061	822 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	MEC3	Q02574	474 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	YPL071C	Q02864	156 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	FMP30	Q02883	468 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	HMO1	Q03973	246 aa	Known RBP	4.9	□□□□□ -1.62
GAL4	YPL248C	YOL036W	Q08206	761 aa		4.9	□□□□□ -1.62
GAL4	YPL248C	FAP7	Q12055	197 aa	Predicted RBP	4.9	□□□□□ -1.62
GAL4	YPL248C	RVB2	Q12464	471 aa	Known RBP	4.9	□□□□□ -1.62
GAL4	YPL248C	LSO2	Q3E772	92 aa	Known RBP	4.9	□□□□□ -1.62
GAL4	YPL248C	HO	P09932	586 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	MEI4	P29467	408 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	ATP3	P38077	311 aa	Known RBP	4.9	□□□□□ -1.63
GAL4	YPL248C	TDA3	P38758	523 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	KHA1	P40309	873 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	CCT5	P40413	562 aa	Known RBP	4.9	□□□□□ -1.63
GAL4	YPL248C	DPH1	P40487	425 aa	Known RBP	4.9	□□□□□ -1.63
GAL4	YPL248C	TEL2	P53038	688 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	YGR012W	P53206	393 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	BSC5	P53755	489 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	KRE28	Q04431	385 aa		4.9	□□□□□ -1.63
GAL4	YPL248C	YAP1	P19880	650 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	MRPL8	P22353	238 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	CLB1	P24868	471 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	CWH43	P25618	953 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	CDC15	P27636	974 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	FUN30	P31380	1131 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	LOT5	P34234	306 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	SIP3	P38717	1229 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	VHR1	P40522	640 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	URB2	P47108	1174 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	YGL242C	P53066	181 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	EAF7	P53911	425 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	SPC24	Q04477	213 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	SEC10	Q06245	871 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
GAL4	YPL248C	PML1	Q07930	204 aa	Predicted RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	SKS1	Q12505	502 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	CCP1	P00431	361 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	FUR4	P05316	633 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	ALG1	P16661	449 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	MSB1	P21339	1137 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	DAL7	P21826	554 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	ROX1	P25042	368 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	PRD1	P25375	712 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	SDS22	P36047	338 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	BET3	P36149	193 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	YBR138C	P38277	524 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	LCB2	P40970	561 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	VMA10	P48836	114 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	TAF4	P50105	388 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	YGL117W	P53133	265 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	YGR125W	P53273	1036 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	NAF1	P53919	492 aa	Known RBP	4.89	□□□□□ -1.63
GAL4	YPL248C	UFD2	P54860	961 aa		4.89	□□□□□ -1.63
GAL4	YPL248C	UGO1	Q03327	502 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms