RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C PEP8P40335 379 aa5.52□□□□□ -1.53
RAT1YOR048C TAH11P47112 604 aa5.52□□□□□ -1.53
RAT1YOR048C SKI8Q02793 397 aaPredicted RBP5.52□□□□□ -1.53
RAT1YOR048C PHM6Q05637 104 aa5.52□□□□□ -1.53
RAT1YOR048C YEL077CQ3E7X8 1277 aa5.52□□□□□ -1.53
RAT1YOR048C PGK1P00560 416 aaKnown RBP5.52□□□□□ -1.53
RAT1YOR048C MPH2P0CD99 609 aa5.52□□□□□ -1.53
RAT1YOR048C SAN1P22470 610 aa5.52□□□□□ -1.53
RAT1YOR048C HSP78P33416 811 aa5.52□□□□□ -1.53
RAT1YOR048C HPM1P40481 377 aa5.52□□□□□ -1.53
RAT1YOR048C MAM33P40513 266 aa5.52□□□□□ -1.53
RAT1YOR048C MPH1P40562 993 aa5.52□□□□□ -1.53
RAT1YOR048C FAR3P46671 204 aa5.52□□□□□ -1.53
RAT1YOR048C LIA1P47120 325 aaKnown RBP5.52□□□□□ -1.53
RAT1YOR048C RPS7BP48164 190 aaKnown RBP5.52□□□□□ -1.53
RAT1YOR048C PAN2P53010 1115 aaPredicted RBP5.52□□□□□ -1.53
RAT1YOR048C RTT102P53330 157 aa5.52□□□□□ -1.53
RAT1YOR048C YLR455WQ06188 304 aa5.52□□□□□ -1.53
RAT1YOR048C CDC73Q06697 393 aa5.52□□□□□ -1.53
RAT1YOR048C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RAT1YOR048C VHS3Q08438 674 aa5.52□□□□□ -1.53
RAT1YOR048C ILS1P09436 1072 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C EST1P17214 699 aaPredicted RBP5.51□□□□□ -1.53
RAT1YOR048C SLY1P22213 666 aa5.51□□□□□ -1.53
RAT1YOR048C VAC17P25591 423 aa5.51□□□□□ -1.53
RAT1YOR048C NPL6P32832 435 aa5.51□□□□□ -1.53
RAT1YOR048C TRM2P33753 639 aa5.51□□□□□ -1.53
RAT1YOR048C ERT1P38140 529 aa5.51□□□□□ -1.53
RAT1YOR048C VID24P38263 362 aa5.51□□□□□ -1.53
RAT1YOR048C PHO89P38361 574 aa5.51□□□□□ -1.53
RAT1YOR048C AIM20P40451 204 aa5.51□□□□□ -1.53
RAT1YOR048C HST2P53686 357 aa5.51□□□□□ -1.53
RAT1YOR048C YNL146WP53906 100 aa5.51□□□□□ -1.53
RAT1YOR048C TDA5Q06417 326 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C RLP24Q07915 199 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C IES3Q12345 250 aa5.51□□□□□ -1.53
RAT1YOR048C PDC5P16467 563 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C KAR4P25583 335 aa5.51□□□□□ -1.53
RAT1YOR048C URA7P28274 579 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C HEM12P32347 362 aaPredicted RBP5.51□□□□□ -1.53
RAT1YOR048C MRE11P32829 692 aa5.51□□□□□ -1.53
RAT1YOR048C SIP2P34164 415 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C REG2P38232 338 aa5.51□□□□□ -1.53
RAT1YOR048C ASN1P49089 572 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C SCS3P53012 380 aa5.51□□□□□ -1.53
RAT1YOR048C YNL011CP53980 444 aa5.51□□□□□ -1.53
RAT1YOR048C STE20Q03497 939 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C AAD15Q08361 143 aa5.51□□□□□ -1.53
RAT1YOR048C IES4Q08561 116 aa5.51□□□□□ -1.53
RAT1YOR048C SLF1Q12034 447 aaKnown RBP5.51□□□□□ -1.53
RAT1YOR048C YLL058WQ12198 575 aa5.51□□□□□ -1.53
RAT1YOR048C AI5_BETAQ9ZZX0 354 aa5.51□□□□□ -1.53
RAT1YOR048C SFL1P20134 766 aa5.5□□□□□ -1.53
RAT1YOR048C PRR1P28708 518 aa5.5□□□□□ -1.53
RAT1YOR048C UTR4P32626 227 aa5.5□□□□□ -1.53
RAT1YOR048C CYM1P32898 989 aa5.5□□□□□ -1.53
RAT1YOR048C TFC3P34111 1160 aa5.5□□□□□ -1.53
RAT1YOR048C FTR1P40088 404 aa5.5□□□□□ -1.53
RAT1YOR048C SET2P46995 733 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C DCP2P53550 970 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C PRM6Q04705 352 aa5.5□□□□□ -1.53
RAT1YOR048C CDD1Q06549 142 aa5.5□□□□□ -1.53
RAT1YOR048C ENT4Q07872 247 aa5.5□□□□□ -1.53
RAT1YOR048C AIM7Q12156 149 aa5.5□□□□□ -1.53
RAT1YOR048C YLR278CQ05854 1341 aa5.5□□□□□ -1.53
RAT1YOR048C ART10P18634 518 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C CCR4P31384 837 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C SEC21P32074 935 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C DAL1P32375 460 aa5.5□□□□□ -1.53
RAT1YOR048C UTR2P32623 467 aa5.5□□□□□ -1.53
RAT1YOR048C TGL1P34163 548 aa5.5□□□□□ -1.53
RAT1YOR048C PTC1P35182 281 aa5.5□□□□□ -1.53
RAT1YOR048C SPC42P36094 363 aa5.5□□□□□ -1.53
RAT1YOR048C MRM2P53123 320 aa5.5□□□□□ -1.53
RAT1YOR048C HXT15P54854 567 aa5.5□□□□□ -1.53
RAT1YOR048C MUB1Q03162 620 aa5.5□□□□□ -1.53
RAT1YOR048C CHS5Q12114 671 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C FKS1P38631 1876 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C VMA2P16140 517 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C KIN82P25341 720 aa5.5□□□□□ -1.53
RAT1YOR048C ATO2P32907 282 aa5.5□□□□□ -1.53
RAT1YOR048C AGP2P38090 596 aa5.5□□□□□ -1.53
RAT1YOR048C PCA1P38360 1216 aa5.5□□□□□ -1.53
RAT1YOR048C SSP120P39931 234 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C EAF5P39995 279 aa5.5□□□□□ -1.53
RAT1YOR048C JEM1P40358 645 aa5.5□□□□□ -1.53
RAT1YOR048C HOS4P40480 1083 aa5.5□□□□□ -1.53
RAT1YOR048C FET4P40988 552 aa5.5□□□□□ -1.53
RAT1YOR048C NAN1Q02931 896 aaKnown RBP5.5□□□□□ -1.53
RAT1YOR048C REH1Q06709 432 aa5.5□□□□□ -1.53
RAT1YOR048C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53 RIP-Chip
RAT1YOR048C ERG20P08524 352 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C TUB3P09734 445 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C CDC3P32457 520 aaKnown RBP5.49□□□□□ -1.53
RAT1YOR048C COY1P34237 679 aa5.49□□□□□ -1.53
RAT1YOR048C MSR1P38714 643 aa5.49□□□□□ -1.53
RAT1YOR048C RIM4P38741 713 aa5.49□□□□□ -1.53
RAT1YOR048C PRM2P40534 656 aa5.49□□□□□ -1.53
RAT1YOR048C RRN7P40992 514 aa5.49□□□□□ -1.53
RAT1YOR048C YGR127WP53275 312 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms