RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	BUD8	P41698	603 aa		3.23	□□□□□ -1.89
CDC33	YOL139C	ENP2	P48234	707 aa	Known RBP	3.23	□□□□□ -1.89
CDC33	YOL139C	RCR2	Q03446	210 aa	Known RBP	3.23	□□□□□ -1.89
CDC33	YOL139C	APM4	Q99186	491 aa		3.23	□□□□□ -1.89
CDC33	YOL139C	NOP14	Q99207	810 aa	Known RBP	3.23	□□□□□ -1.89
CDC33	YOL139C	YMR084W	A2P2R3	262 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	LEU2	P04173	364 aa	Predicted RBP	3.22	□□□□□ -1.89
CDC33	YOL139C	ELF1	P36053	145 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	TDA3	P38758	523 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	IES1	P43579	692 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	SDA1	P53313	767 aa	Known RBP	3.22	□□□□□ -1.89
CDC33	YOL139C	ORM2	Q06144	216 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	YDL073W	Q07454	984 aa		3.22	□□□□□ -1.89
CDC33	YOL139C	RPS17A	P02407	136 aa	Known RBP	3.21	□□□□□ -1.9
CDC33	YOL139C	RPS17B	P14127	136 aa	Known RBP	3.21	□□□□□ -1.9
CDC33	YOL139C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
CDC33	YOL139C	AAD3	P25612	363 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	PRE4	P30657	266 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	SFP1	P32432	683 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	DHR2	P36009	735 aa	Predicted RBP	3.21	□□□□□ -1.9
CDC33	YOL139C	APD1	P38281	316 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	TAX4	P47030	604 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	TAF4	P50105	388 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	NOP15	P53927	220 aa	Predicted RBP	3.21	□□□□□ -1.9
CDC33	YOL139C	YPS7	Q06325	596 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	STP4	Q07351	490 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	ZPS1	Q12512	249 aa		3.21	□□□□□ -1.9
CDC33	YOL139C	TUF1	P02992	437 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	CPA2	P03965	1118 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	RPL7A	P05737	244 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	RPL8A	P17076	256 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	HOP1	P20050	605 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	LOT5	P34234	306 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	XBP1	P40489	647 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	PSA1	P41940	361 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	GAT1	P43574	510 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	COQ6	P53318	479 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	ALG12	P53730	551 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	EFR3	Q03653	782 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	GFD1	Q04839	188 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	RPL7B	Q12213	244 aa	Known RBP	3.2	□□□□□ -1.9
CDC33	YOL139C	RGT2	Q12300	763 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	AI5_ALPHA	Q9ZZX1	630 aa		3.2	□□□□□ -1.9
CDC33	YOL139C	TUP1	P16649	713 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	CNE1	P27825	502 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	CAP1	P28495	268 aa	Known RBP	3.19	□□□□□ -1.9
CDC33	YOL139C	MRPL7	P36519	292 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	RIM4	P38741	713 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	PRM2	P40534	656 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	GZF3	P42944	551 aa	Known RBP	3.19	□□□□□ -1.9
CDC33	YOL139C	YGR153W	P48238	217 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	AIM41	Q12032	185 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	TGS1	Q12052	315 aa		3.19	□□□□□ -1.9
CDC33	YOL139C	WHI2	P12611	486 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	NUP1	P20676	1076 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	TSR4	P25040	408 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	YUR1	P26725	428 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	RPC34	P32910	317 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	OAF3	P36023	863 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	NMD2	P38798	1089 aa	Known RBP	3.18	□□□□□ -1.9
CDC33	YOL139C	DUN1	P39009	513 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	TMN3	P40071	706 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	FTR1	P40088	404 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	OPT1	P40897	799 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	YJR096W	P47137	282 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	PIP2	P52960	996 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	YIP4	P53093	235 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	YGR054W	P53235	642 aa	Known RBP	3.18	□□□□□ -1.9
CDC33	YOL139C	YNL018C	P53976	612 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	RPS15	Q01855	142 aa	Known RBP	3.18	□□□□□ -1.9
CDC33	YOL139C	YPL216W	Q08964	1102 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	HFI1	Q12060	488 aa		3.18	□□□□□ -1.9
CDC33	YOL139C	HEM1	P09950	548 aa	Predicted RBP	3.17	□□□□□ -1.9
CDC33	YOL139C	GSY2	P27472	705 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	MF(ALPHA)2	P32435	120 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	DID4	P36108	232 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	PPE1	P38796	400 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	CRG1	P38892	291 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
CDC33	YOL139C	HXT6	P39003	570 aa	Known RBP	3.17	□□□□□ -1.9
CDC33	YOL139C	HXT7	P39004	570 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	MPS1	P54199	764 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	YPL068C	Q02749	293 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	MFM1	Q02783	413 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	USA1	Q03714	838 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	TRS23	Q03784	219 aa		3.17	□□□□□ -1.9
CDC33	YOL139C	SEC65	P29478	273 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	PRP19	P32523	503 aa	Known RBP	3.16	□□□□□ -1.9
CDC33	YOL139C	PPG1	P32838	368 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	BRN1	P38170	754 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	CDS1	P38221	457 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	MNN1	P39106	762 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	YEL025C	P39991	1188 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	MNN11	P46985	422 aa	Known RBP	3.16	□□□□□ -1.9
CDC33	YOL139C	BUD17	P53727	317 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	STP1	Q00947	519 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	PTA1	Q01329	785 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC33	YOL139C	ECM9	Q02202	377 aa		3.16	□□□□□ -1.9
CDC33	YOL139C	YTM1	Q12024	460 aa	Predicted RBP	3.16	□□□□□ -1.9
CDC33	YOL139C	BEM3	P32873	1128 aa		3.15	□□□□□ -1.91
CDC33	YOL139C	SPC97	P38863	823 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms