RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C MSS1P32559 526 aaPredicted RBP0.83□□□□□ -2.28
NIP1YMR309C GCS1P35197 352 aa0.83□□□□□ -2.28
NIP1YMR309C MNN4P36044 1178 aa0.83□□□□□ -2.28
NIP1YMR309C ELF1P36053 145 aa0.83□□□□□ -2.28
NIP1YMR309C TDA3P38758 523 aa0.83□□□□□ -2.28
NIP1YMR309C PIH1P38768 344 aa0.83□□□□□ -2.28
NIP1YMR309C MAL11P53048 616 aa0.83□□□□□ -2.28
NIP1YMR309C BRE5P53741 515 aaKnown RBP0.83□□□□□ -2.28
NIP1YMR309C DAK1P54838 584 aaKnown RBP0.83□□□□□ -2.28
NIP1YMR309C MFM1Q02783 413 aa0.83□□□□□ -2.28
NIP1YMR309C LEE1Q02799 301 aaKnown RBP0.83□□□□□ -2.28
NIP1YMR309C RPN4Q03465 531 aa0.83□□□□□ -2.28
NIP1YMR309C UFO1Q04511 668 aa0.83□□□□□ -2.28
NIP1YMR309C VPS36Q06696 566 aa0.83□□□□□ -2.28
NIP1YMR309C HEM1P09950 548 aaPredicted RBP0.82□□□□□ -2.28
NIP1YMR309C MIH1P23748 554 aa0.82□□□□□ -2.28
NIP1YMR309C PET127P32606 800 aa0.82□□□□□ -2.28
NIP1YMR309C PPG1P32838 368 aa0.82□□□□□ -2.28
NIP1YMR309C SSZ1P38788 538 aaKnown RBP0.82□□□□□ -2.28
NIP1YMR309C PPE1P38796 400 aa0.82□□□□□ -2.28
NIP1YMR309C DUN1P39009 513 aa0.82□□□□□ -2.28
NIP1YMR309C SNO3P43544 222 aa0.82□□□□□ -2.28
NIP1YMR309C SDA1P53313 767 aaKnown RBP0.82□□□□□ -2.28
NIP1YMR309C ATP23P53722 227 aa0.82□□□□□ -2.28
NIP1YMR309C ARP4P80428 489 aa0.82□□□□□ -2.28
NIP1YMR309C TFB2Q02939 513 aa0.82□□□□□ -2.28
NIP1YMR309C RSC9Q03124 581 aa0.82□□□□□ -2.28
NIP1YMR309C PPN1Q04119 674 aa0.82□□□□□ -2.28
NIP1YMR309C ENT2Q05785 613 aa0.82□□□□□ -2.28
NIP1YMR309C YFT2Q06676 274 aa0.82□□□□□ -2.28
NIP1YMR309C NTG2Q08214 380 aa0.82□□□□□ -2.28
NIP1YMR309C YPL216WQ08964 1102 aa0.82□□□□□ -2.28
NIP1YMR309C IMG2P25642 146 aaPredicted RBP0.81□□□□□ -2.28
NIP1YMR309C AKL1P38080 1108 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C APD1P38281 316 aa0.81□□□□□ -2.28
NIP1YMR309C PCM1P38628 557 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C DED81P38707 554 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C NUG1P40010 520 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C YAT2P40017 923 aa0.81□□□□□ -2.28
NIP1YMR309C JHD1P40034 492 aa0.81□□□□□ -2.28
NIP1YMR309C TMN3P40071 706 aa0.81□□□□□ -2.28
NIP1YMR309C PXA1P41909 870 aa0.81□□□□□ -2.28
NIP1YMR309C BIT61P47041 543 aa0.81□□□□□ -2.28
NIP1YMR309C YJL043WP47053 257 aa0.81□□□□□ -2.28
NIP1YMR309C YJR039WP47107 1121 aa0.81□□□□□ -2.28
NIP1YMR309C SPO1P53541 631 aa0.81□□□□□ -2.28
NIP1YMR309C RPL7AP05737 244 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C PCL2P25693 308 aa0.81□□□□□ -2.28
NIP1YMR309C YPT7P32939 208 aa0.81□□□□□ -2.28
NIP1YMR309C BST1P43571 1029 aa0.81□□□□□ -2.28
NIP1YMR309C ENP2P48234 707 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C YGR153WP48238 217 aa0.81□□□□□ -2.28
NIP1YMR309C HLJ1P48353 224 aa0.81□□□□□ -2.28
NIP1YMR309C IDP3P53982 420 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C CEF1Q03654 590 aaPredicted RBP0.81□□□□□ -2.28
NIP1YMR309C SCW10Q04951 389 aa0.81□□□□□ -2.28
NIP1YMR309C YLR407WQ06070 228 aa0.81□□□□□ -2.28
NIP1YMR309C IZH3Q07959 543 aa0.81□□□□□ -2.28
NIP1YMR309C RPL7BQ12213 244 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C PRS5Q12265 496 aaKnown RBP0.81□□□□□ -2.28
NIP1YMR309C ZPS1Q12512 249 aa0.81□□□□□ -2.28
NIP1YMR309C YPR089WO13585 888 aa0.8□□□□□ -2.28
NIP1YMR309C RPS17AP02407 136 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C RPS17BP14127 136 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C PRP19P32523 503 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C YKU70P32807 602 aa0.8□□□□□ -2.28
NIP1YMR309C YHR033WP38690 423 aa0.8□□□□□ -2.28
NIP1YMR309C OCA5P38738 679 aa0.8□□□□□ -2.28
NIP1YMR309C BUD6P41697 788 aa0.8□□□□□ -2.28
NIP1YMR309C YIP4P53093 235 aa0.8□□□□□ -2.28
NIP1YMR309C MET13P53128 600 aa0.8□□□□□ -2.28
NIP1YMR309C YNL193WP53870 558 aa0.8□□□□□ -2.28
NIP1YMR309C YHM2Q04013 314 aa0.8□□□□□ -2.28
NIP1YMR309C GFD1Q04839 188 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C YTH1Q06102 208 aaPredicted RBP0.8□□□□□ -2.28
NIP1YMR309C YDL073WQ07454 984 aa0.8□□□□□ -2.28
NIP1YMR309C NDD1Q08887 554 aa0.8□□□□□ -2.28
NIP1YMR309C AIM41Q12032 185 aa0.8□□□□□ -2.28
NIP1YMR309C DCS2Q12123 353 aa0.8□□□□□ -2.28
NIP1YMR309C CRC1Q12289 327 aa0.8□□□□□ -2.28
NIP1YMR309C YMR084WA2P2R3 262 aa0.8□□□□□ -2.28
NIP1YMR309C YPT1P01123 206 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C AQY1P0CD91 305 aa0.8□□□□□ -2.28
NIP1YMR309C YER190C-BP0CX94 160 aa0.8□□□□□ -2.28
NIP1YMR309C YEL077W-AP0CX95 160 aa0.8□□□□□ -2.28
NIP1YMR309C YGR296C-BP0CX96 160 aa0.8□□□□□ -2.28
NIP1YMR309C YPL283W-BP0CX97 160 aa0.8□□□□□ -2.28
NIP1YMR309C YPR204C-AP0CX98 160 aa0.8□□□□□ -2.28
NIP1YMR309C URE2P23202 354 aaKnown RBP0.8□□□□□ -2.28
NIP1YMR309C MGM1P32266 881 aa0.8□□□□□ -2.28
NIP1YMR309C RPC34P32910 317 aa0.8□□□□□ -2.28
NIP1YMR309C DHR2P36009 735 aaPredicted RBP0.8□□□□□ -2.28
NIP1YMR309C OAF1P39720 1047 aaPredicted RBP0.8□□□□□ -2.28
NIP1YMR309C YEL025CP39991 1188 aa0.8□□□□□ -2.28
NIP1YMR309C PEA2P40091 420 aa0.8□□□□□ -2.28
NIP1YMR309C RET2P43621 546 aa0.8□□□□□ -2.28
NIP1YMR309C BSP1Q06604 576 aa0.8□□□□□ -2.28
NIP1YMR309C SRL1Q08673 210 aa0.8□□□□□ -2.28
NIP1YMR309C BUD7Q08754 746 aa0.8□□□□□ -2.28
NIP1YMR309C TGS1Q12052 315 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms