RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W VPS3P23643 1011 aa4.81□□□□□ -1.64
CBF5YLR175W EFB1P32471 206 aaKnown RBP4.81□□□□□ -1.64
CBF5YLR175W MRP4P32902 394 aa4.81□□□□□ -1.64
CBF5YLR175W CSE2P33308 149 aa4.81□□□□□ -1.64
CBF5YLR175W SCD5P34758 872 aa4.81□□□□□ -1.64
CBF5YLR175W RRP1P35178 278 aaPredicted RBP4.81□□□□□ -1.64
CBF5YLR175W HEL1P36113 551 aa4.81□□□□□ -1.64
CBF5YLR175W TDA3P38758 523 aa4.81□□□□□ -1.64
CBF5YLR175W PMC1P38929 1173 aaPredicted RBP4.81□□□□□ -1.64
CBF5YLR175W POL31P46957 487 aa4.81□□□□□ -1.64
CBF5YLR175W MND1P53102 219 aa4.81□□□□□ -1.64
CBF5YLR175W YGL036WP53185 909 aaPredicted RBP4.81□□□□□ -1.64
CBF5YLR175W JJJ1P53863 590 aa4.81□□□□□ -1.64
CBF5YLR175W STP1Q00947 519 aa4.81□□□□□ -1.64
CBF5YLR175W MZM1Q03429 123 aaPredicted RBP4.81□□□□□ -1.64
CBF5YLR175W RCR2Q03446 210 aaKnown RBP4.81□□□□□ -1.64
CBF5YLR175W YLR455WQ06188 304 aa4.81□□□□□ -1.64
CBF5YLR175W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
CBF5YLR175W YLR001CQ07895 862 aa4.81□□□□□ -1.64
CBF5YLR175W MET32Q12041 191 aa4.81□□□□□ -1.64
CBF5YLR175W BI3Q9ZZW7 517 aa4.81□□□□□ -1.64
CBF5YLR175W GAL80P04387 435 aa4.81□□□□□ -1.64
CBF5YLR175W HAP2P06774 265 aa4.81□□□□□ -1.64
CBF5YLR175W MSD1P15179 658 aaKnown RBP4.81□□□□□ -1.64
CBF5YLR175W MRPL33P20084 86 aa4.81□□□□□ -1.64
CBF5YLR175W VBA3P25594 458 aa4.81□□□□□ -1.64
CBF5YLR175W GAC1P28006 793 aa4.81□□□□□ -1.64
CBF5YLR175W BYE1P36106 594 aa4.81□□□□□ -1.64
CBF5YLR175W VBA5P36172 582 aa4.81□□□□□ -1.64
CBF5YLR175W AGP2P38090 596 aa4.81□□□□□ -1.64
CBF5YLR175W SHE3P38272 425 aaKnown RBP4.81□□□□□ -1.64
CBF5YLR175W MGE1P38523 228 aa4.81□□□□□ -1.64
CBF5YLR175W HIS2P38635 335 aa4.81□□□□□ -1.64
CBF5YLR175W YHR202WP38887 602 aa4.81□□□□□ -1.64
CBF5YLR175W GEM1P39722 662 aa4.81□□□□□ -1.64
CBF5YLR175W OPT1P40897 799 aa4.81□□□□□ -1.64
CBF5YLR175W SXM1Q04175 944 aaKnown RBP4.81□□□□□ -1.64
CBF5YLR175W ESC8Q08119 714 aa4.81□□□□□ -1.64
CBF5YLR175W CIR2Q08822 631 aa4.81□□□□□ -1.64
CBF5YLR175W TRE1Q08919 783 aa4.81□□□□□ -1.64
CBF5YLR175W JIP3O13555 125 aa4.8□□□□□ -1.64
CBF5YLR175W YLR462WO13556 202 aa4.8□□□□□ -1.64
CBF5YLR175W CDC4P07834 779 aa4.8□□□□□ -1.64
CBF5YLR175W SAT4P25333 603 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W DBF4P32325 704 aa4.8□□□□□ -1.64
CBF5YLR175W ABD1P32783 436 aaPredicted RBP4.8□□□□□ -1.64
CBF5YLR175W FRE1P32791 686 aa4.8□□□□□ -1.64
CBF5YLR175W CNS1P33313 385 aa4.8□□□□□ -1.64
CBF5YLR175W SLA2P33338 968 aa4.8□□□□□ -1.64
CBF5YLR175W HMT1P38074 348 aa4.8□□□□□ -1.64
CBF5YLR175W NCL1P38205 684 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W REI1P38344 393 aaPredicted RBP4.8□□□□□ -1.64
CBF5YLR175W YHL049CP38722 271 aa4.8□□□□□ -1.64
CBF5YLR175W SMF1P38925 575 aa4.8□□□□□ -1.64
CBF5YLR175W YEL075CP39972 122 aa4.8□□□□□ -1.64
CBF5YLR175W YER189WP40104 122 aa4.8□□□□□ -1.64
CBF5YLR175W SIP5P40210 489 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W ASG1P40467 964 aa4.8□□□□□ -1.64
CBF5YLR175W ALA1P40825 983 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W MAD1P40957 749 aa4.8□□□□□ -1.64
CBF5YLR175W YFL064CP43540 174 aa4.8□□□□□ -1.64
CBF5YLR175W SNZ3P43545 298 aa4.8□□□□□ -1.64
CBF5YLR175W STB4P50104 949 aa4.8□□□□□ -1.64
CBF5YLR175W SNZ2P53824 298 aa4.8□□□□□ -1.64
CBF5YLR175W GPD1Q00055 391 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W DIG1Q03063 452 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W YMR114CQ04471 368 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W PKH2Q12236 1081 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W YBL111CQ3E7Y5 667 aa4.8□□□□□ -1.64
CBF5YLR175W NOP14Q99207 810 aaKnown RBP4.8□□□□□ -1.64
CBF5YLR175W RAS1P01119 309 aa4.79□□□□□ -1.64
CBF5YLR175W PUT4P15380 627 aa4.79□□□□□ -1.64
CBF5YLR175W SFL1P20134 766 aa4.79□□□□□ -1.64
CBF5YLR175W PAP1P29468 568 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W MET4P32389 672 aa4.79□□□□□ -1.64
CBF5YLR175W VPH1P32563 840 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W PEP7P32609 515 aa4.79□□□□□ -1.64
CBF5YLR175W GCG1P32656 232 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W CCL1P37366 393 aa4.79□□□□□ -1.64
CBF5YLR175W APN2P38207 520 aa4.79□□□□□ -1.64
CBF5YLR175W RRT2P38332 387 aa4.79□□□□□ -1.64
CBF5YLR175W PCM1P38628 557 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W MSC7P38694 644 aa4.79□□□□□ -1.64
CBF5YLR175W LCP5P40079 357 aaPredicted RBP4.79□□□□□ -1.64
CBF5YLR175W CWC22P53333 577 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W SPC98P53540 846 aa4.79□□□□□ -1.64
CBF5YLR175W MTG1Q03151 367 aaPredicted RBP4.79□□□□□ -1.64
CBF5YLR175W VTI1Q04338 217 aa4.79□□□□□ -1.64
CBF5YLR175W DIS3Q08162 1001 aaKnown RBP4.79□□□□□ -1.64
CBF5YLR175W APC5Q08683 685 aa4.79□□□□□ -1.64
CBF5YLR175W REC8Q12188 680 aa4.79□□□□□ -1.64
CBF5YLR175W SPO21Q12411 609 aa4.79□□□□□ -1.64
CBF5YLR175W RMP1Q12530 201 aa4.79□□□□□ -1.64
CBF5YLR175W ATP1P07251 545 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W PMS1P14242 873 aa4.78□□□□□ -1.64
CBF5YLR175W VMA4P22203 233 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W CAD1P24813 409 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W YBL055CP34220 418 aaPredicted RBP4.78□□□□□ -1.64
CBF5YLR175W YBR284WP38150 797 aa4.78□□□□□ -1.64
CBF5YLR175W MMS21P38632 267 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms