RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeast

Gene RFU1, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFU1	YLR073C	MSD1	P15179	658 aa	Known RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	SPO16	P17122	198 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	SAN1	P22470	610 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	MBR1	P23493	339 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	PRP19	P32523	503 aa	Known RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RFU1	YLR073C	SSN3	P39073	555 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	FYV8	P46949	817 aa	Known RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	BIO5	P53744	561 aa	Known RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	HDA1	P53973	706 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	EEB1	Q02891	456 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	YPL109C	Q02981	657 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	ISU1	Q03020	165 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	TRS130	Q03660	1102 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	RNH1	Q04740	348 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	ISR1	Q06098	443 aa	Known RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	YCG1	Q06680	1035 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	SGO1	Q08490	590 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	YTM1	Q12024	460 aa	Predicted RBP	4.86	□□□□□ -1.63
RFU1	YLR073C	MDM12	Q92328	271 aa		4.86	□□□□□ -1.63
RFU1	YLR073C	TUF1	P02992	437 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	NOT3	P06102	836 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	RPL40A	P0CH08	128 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	RPL40B	P0CH09	128 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	RPS6A	P0CX37	236 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	RPS6B	P0CX38	236 aa	Predicted RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	BET2	P20133	325 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	RIT1	P23796	513 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	KIN82	P25341	720 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	VBA3	P25594	458 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	IMG2	P25642	146 aa	Predicted RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	CDC48	P25694	835 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	CMK1	P27466	446 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	MCM5	P29496	775 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	DPH2	P32461	534 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	PET309	P32522	965 aa	Predicted RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	ORC2	P32833	620 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	SPC29	P33419	253 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	DRE2	P36152	348 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	SPT8	P38915	602 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	CCC2	P38995	1004 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	RTT105	P40063	208 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	KAP123	P40069	1113 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	EMP65	P40085	556 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	ENP2	P48234	707 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	FMS1	P50264	508 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	ZIP2	P53061	704 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	MLC1	P53141	149 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	LIF1	P53150	421 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	NPY1	P53164	384 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	SEC5	P89102	971 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	RPS15	Q01855	142 aa	Known RBP	4.85	□□□□□ -1.63
RFU1	YLR073C	ADI1	Q03677	179 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	YKU80	Q04437	629 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	MMR1	Q06324	491 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	HDA3	Q06623	655 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	YPR084W	Q06821	456 aa		4.85	□□□□□ -1.63
RFU1	YLR073C	CNS1	P33313	385 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	YKL097C	P34245	136 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	DHR2	P36009	735 aa	Predicted RBP	4.84	□□□□□ -1.63
RFU1	YLR073C	FTH1	P38310	465 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	SLX1	P38324	304 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	SPC72	P39723	622 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	PCL7	P40186	285 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	SEC9	P40357	651 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	SET2	P46995	733 aa	Known RBP	4.84	□□□□□ -1.63
RFU1	YLR073C	NIT2	P47016	307 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	RNR4	P49723	345 aa	Known RBP	4.84	□□□□□ -1.63
RFU1	YLR073C	MAL11	P53048	616 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	YGR130C	P53278	816 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	TDA9	Q04545	1251 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	YLR455W	Q06188	304 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	PIG1	Q06216	648 aa		4.84	□□□□□ -1.63
RFU1	YLR073C	BEM2	P39960	2167 aa	Known RBP	4.84	□□□□□ -1.64
RFU1	YLR073C	RIF1	P29539	1916 aa		4.84	□□□□□ -1.64
RFU1	YLR073C	PDR18	P53756	1333 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	TRP2	P00899	507 aa	Known RBP	4.83	□□□□□ -1.64
RFU1	YLR073C	CMP2	P14747	604 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	SQT1	P35184	431 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	BYE1	P36106	594 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	APN2	P38207	520 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	RFS1	P38234	210 aa	Known RBP	4.83	□□□□□ -1.64
RFU1	YLR073C	APM2	P38700	605 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	OTU2	P38747	307 aa	Known RBP	4.83	□□□□□ -1.64
RFU1	YLR073C	PPE1	P38796	400 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	VPS41	P38959	992 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	SIT1	P39980	628 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	NOP16	P40007	231 aa	Known RBP	4.83	□□□□□ -1.64
RFU1	YLR073C	YIL092W	P40497	633 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	AXL1	P40851	1208 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	SEC26	P41810	973 aa	Known RBP	4.83	□□□□□ -1.64
RFU1	YLR073C	ERR3	P42222	437 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	GUP1	P53154	560 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	ENV11	P53246	860 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	VPS9	P54787	451 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	RIP-Chip
RFU1	YLR073C	SFI1	Q12369	946 aa		4.83	□□□□□ -1.64
RFU1	YLR073C	YLR422W	Q06409	1932 aa		4.82	□□□□□ -1.64
RFU1	YLR073C	HOM2	P13663	365 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 397.5 ms