RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C MRK1P50873 501 aa5.92□□□□□ -1.46
SED5YLR026C SPO1P53541 631 aa5.92□□□□□ -1.46
SED5YLR026C TIM50Q02776 476 aa5.92□□□□□ -1.46
SED5YLR026C TRS23Q03784 219 aa5.92□□□□□ -1.46
SED5YLR026C YDR179W-AQ03983 463 aa5.92□□□□□ -1.46
SED5YLR026C MRI1Q06489 411 aaKnown RBP5.92□□□□□ -1.46
SED5YLR026C HFI1Q12060 488 aa5.92□□□□□ -1.46
SED5YLR026C DNA2P38859 1522 aa5.91□□□□□ -1.46
SED5YLR026C TUP1P16649 713 aa5.91□□□□□ -1.46
SED5YLR026C SAT4P25333 603 aaKnown RBP5.91□□□□□ -1.46
SED5YLR026C PRE4P30657 266 aa5.91□□□□□ -1.46
SED5YLR026C YMC1P32331 307 aa5.91□□□□□ -1.46
SED5YLR026C IES1P43579 692 aa5.91□□□□□ -1.46
SED5YLR026C FMP30Q02883 468 aa5.91□□□□□ -1.46
SED5YLR026C PPN1Q04119 674 aa5.91□□□□□ -1.46
SED5YLR026C VPS34P22543 875 aa5.9□□□□□ -1.46
SED5YLR026C CRG1P38892 291 aaRIP-Chip data5.9□□□□□ -1.46not detected
SED5YLR026C FPR3P38911 411 aaKnown RBP5.9□□□□□ -1.46
SED5YLR026C VID28P40547 921 aa5.9□□□□□ -1.46
SED5YLR026C MNN11P46985 422 aaKnown RBP5.9□□□□□ -1.46
SED5YLR026C YGR237CP50089 785 aa5.9□□□□□ -1.46
SED5YLR026C NGL2Q03264 515 aaKnown RBP5.9□□□□□ -1.46
SED5YLR026C OSW1Q08692 278 aa5.9□□□□□ -1.46
SED5YLR026C FAP7Q12055 197 aaPredicted RBP5.9□□□□□ -1.46
SED5YLR026C TPK2P06245 380 aa5.89□□□□□ -1.47
SED5YLR026C HOM2P13663 365 aaKnown RBP5.89□□□□□ -1.47
SED5YLR026C STE4P18851 423 aa5.89□□□□□ -1.47
SED5YLR026C UGP1P32861 499 aaKnown RBP5.89□□□□□ -1.47
SED5YLR026C CDS1P38221 457 aa5.89□□□□□ -1.47
SED5YLR026C PPE1P38796 400 aa5.89□□□□□ -1.47
SED5YLR026C FTR1P40088 404 aa5.89□□□□□ -1.47
SED5YLR026C HFD1Q04458 532 aa5.89□□□□□ -1.47
SED5YLR026C SLK19Q08581 821 aaKnown RBP5.89□□□□□ -1.47
SED5YLR026C ADE5,7P07244 802 aaKnown RBP5.88□□□□□ -1.47
SED5YLR026C PTA1Q01329 785 aaPredicted RBP5.88□□□□□ -1.47
SED5YLR026C FDC1Q03034 503 aa5.88□□□□□ -1.47
SED5YLR026C CDC26P14724 124 aa5.87□□□□□ -1.47
SED5YLR026C DID4P36108 232 aa5.87□□□□□ -1.47
SED5YLR026C YHR033WP38690 423 aa5.87□□□□□ -1.47
SED5YLR026C PRM2P40534 656 aa5.87□□□□□ -1.47
SED5YLR026C ULA1Q12059 462 aa5.87□□□□□ -1.47
SED5YLR026C ORC2P32833 620 aa5.86□□□□□ -1.47
SED5YLR026C YGR054WP53235 642 aaKnown RBP5.86□□□□□ -1.47
SED5YLR026C NSE5Q03718 556 aa5.86□□□□□ -1.47
SED5YLR026C APM4Q99186 491 aa5.86□□□□□ -1.47
SED5YLR026C ERG11P10614 530 aa5.85□□□□□ -1.47
SED5YLR026C DAL3P32459 195 aa5.85□□□□□ -1.47
SED5YLR026C MRPL7P36519 292 aa5.85□□□□□ -1.47
SED5YLR026C DAK1P54838 584 aaKnown RBP5.85□□□□□ -1.47
SED5YLR026C KOG1P38873 1557 aa5.84□□□□□ -1.47
SED5YLR026C EHT1P38295 451 aa5.84□□□□□ -1.47
SED5YLR026C THI6P41835 540 aa5.84□□□□□ -1.47
SED5YLR026C TAX4P47030 604 aa5.84□□□□□ -1.47
SED5YLR026C MFM1Q02783 413 aa5.84□□□□□ -1.47
SED5YLR026C EFR3Q03653 782 aaKnown RBP5.84□□□□□ -1.47
SED5YLR026C ARG7Q04728 441 aa5.84□□□□□ -1.47
SED5YLR026C YIP4P53093 235 aa5.83□□□□□ -1.48
SED5YLR026C YGL117WP53133 265 aa5.83□□□□□ -1.48
SED5YLR026C HOF1Q05080 669 aa5.83□□□□□ -1.48
SED5YLR026C SWR1Q05471 1514 aa5.83□□□□□ -1.48
SED5YLR026C AAD3P25612 363 aa5.82□□□□□ -1.48
SED5YLR026C DGR2P32330 852 aa5.82□□□□□ -1.48
SED5YLR026C MF(ALPHA)2P32435 120 aa5.82□□□□□ -1.48
SED5YLR026C MTC7P32633 139 aa5.82□□□□□ -1.48
SED5YLR026C SER1P33330 395 aaKnown RBP5.82□□□□□ -1.48
SED5YLR026C RIM13Q03792 727 aa5.82□□□□□ -1.48
SED5YLR026C HLR1Q04429 423 aa5.82□□□□□ -1.48
SED5YLR026C CPR8P53728 308 aa5.81□□□□□ -1.48
SED5YLR026C YCG1Q06680 1035 aa5.81□□□□□ -1.48
SED5YLR026C AIM41Q12032 185 aa5.81□□□□□ -1.48
SED5YLR026C ACO1P19414 778 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SED5YLR026C NUP1P20676 1076 aa5.8□□□□□ -1.48
SED5YLR026C ATP12P22135 325 aa5.8□□□□□ -1.48
SED5YLR026C RIM4P38741 713 aa5.8□□□□□ -1.48
SED5YLR026C YDL183CP48569 320 aa5.8□□□□□ -1.48
SED5YLR026C AFT2Q08957 416 aa5.8□□□□□ -1.48
SED5YLR026C HMG2P12684 1045 aa5.79□□□□□ -1.48
SED5YLR026C CNE1P27825 502 aa5.79□□□□□ -1.48
SED5YLR026C HXT4P32467 576 aa5.79□□□□□ -1.48
SED5YLR026C PIH1P38768 344 aa5.79□□□□□ -1.48
SED5YLR026C YEL025CP39991 1188 aa5.79□□□□□ -1.48
SED5YLR026C CEF1Q03654 590 aaPredicted RBP5.79□□□□□ -1.48
SED5YLR026C NGL1Q08213 363 aaKnown RBP5.79□□□□□ -1.48
SED5YLR026C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SED5YLR026C RMA1P36001 430 aaKnown RBP5.78□□□□□ -1.48
SED5YLR026C RNR4P49723 345 aaKnown RBP5.78□□□□□ -1.48
SED5YLR026C SEG1Q04279 960 aa5.78□□□□□ -1.48
SED5YLR026C YPL216WQ08964 1102 aa5.78□□□□□ -1.48
SED5YLR026C ZPS1Q12512 249 aa5.78□□□□□ -1.48
SED5YLR026C LEU2P04173 364 aaPredicted RBP5.77□□□□□ -1.49
SED5YLR026C ENP2P48234 707 aaKnown RBP5.77□□□□□ -1.49
SED5YLR026C BUD17P53727 317 aa5.77□□□□□ -1.49
SED5YLR026C ARR3Q06598 404 aa5.77□□□□□ -1.49
SED5YLR026C YPR027CQ12079 277 aa5.77□□□□□ -1.49
SED5YLR026C AI5_ALPHAQ9ZZX1 630 aa5.77□□□□□ -1.49
SED5YLR026C DHR2P36009 735 aaPredicted RBP5.76□□□□□ -1.49
SED5YLR026C BRN1P38170 754 aa5.76□□□□□ -1.49
SED5YLR026C UBP12P39538 1254 aa5.76□□□□□ -1.49
SED5YLR026C SNM1P40993 198 aa5.76□□□□□ -1.49
SED5YLR026C PIP2P52960 996 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms