RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	ILS1	P09436	1072 aa	Known RBP	4.79	□□□□□ -1.64
TFA1	YKL028W	GLN4	P13188	809 aa	Known RBP	4.79	□□□□□ -1.64
TFA1	YKL028W	CDC26	P14724	124 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	OLE1	P21147	510 aa	Known RBP	4.79	□□□□□ -1.64
TFA1	YKL028W	CLB4	P24871	460 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	STE13	P33894	931 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	TOD6	P34219	525 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	TAF5	P38129	798 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	IFA38	P38286	347 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	UME6	P39001	836 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	STT3	P39007	718 aa	Known RBP	4.79	□□□□□ -1.64
TFA1	YKL028W	POP2	P39008	433 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	NPR2	P39923	615 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	SHR5	P41912	237 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	YFL052W	P43551	465 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	YJR039W	P47107	1121 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	YPL071C	Q02864	156 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	SRT1	Q03175	343 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	YLR149C	Q99296	730 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	Q0142	Q9ZZW4	58 aa		4.79	□□□□□ -1.64
TFA1	YKL028W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
TFA1	YKL028W	RFA1	P22336	621 aa	Known RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	SGF29	P25554	259 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	ERG3	P32353	365 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	NPR3	P38742	1146 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	SET5	P38890	526 aa	Known RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	BEM4	P39011	633 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	SSP120	P39931	234 aa	Known RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	ARF3	P40994	183 aa	RIP-Chip data	4.78	□□□□□ -1.64	not detected
TFA1	YKL028W	MTC3	P53077	123 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	NOP15	P53927	220 aa	Predicted RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	SSL2	Q00578	843 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	SNO4	Q04902	237 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	YDR341C	Q05506	607 aa	Known RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	CRR1	Q05790	422 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	HSP33	Q08914	237 aa	Known RBP	4.78	□□□□□ -1.64
TFA1	YKL028W	HSP32	Q08992	237 aa		4.78	□□□□□ -1.64
TFA1	YKL028W	MIS1	P09440	975 aa	Known RBP	4.77	□□□□□ -1.65
TFA1	YKL028W	YEL076C-A	P0CX16	216 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YLR464W	P0CX17	216 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	PMS1	P14242	873 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	CBP3	P21560	335 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YBR138C	P38277	524 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YHL012W	P38709	493 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	SSZ1	P38788	538 aa	Known RBP	4.77	□□□□□ -1.65
TFA1	YKL028W	UTP9	P38882	575 aa	Known RBP	4.77	□□□□□ -1.65
TFA1	YKL028W	YEL076C	P39971	216 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	KHA1	P40309	873 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	LYS14	P40971	790 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YFL054C	P43549	646 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	SFB2	P53953	876 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	VPS9	P54787	451 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YMR155W	Q03795	547 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YDR131C	Q03899	556 aa		4.77	□□□□□ -1.65
TFA1	YKL028W	YLR257W	Q06146	321 aa	Known RBP	4.77	□□□□□ -1.65
TFA1	YKL028W	IWR1	Q07532	353 aa	Predicted RBP	4.77	□□□□□ -1.65
TFA1	YKL028W	ARG3	P05150	338 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	RPS13	P05756	151 aa	Known RBP	4.76	□□□□□ -1.65
TFA1	YKL028W	MET17	P06106	444 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	SIR1	P21691	654 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	DGR2	P32330	852 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	RPC82	P32349	654 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	SAC6	P32599	642 aa	Known RBP	4.76	□□□□□ -1.65
TFA1	YKL028W	SAP190	P36123	1033 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	YKR075C	P36155	307 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	YLF2	P38746	405 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	RRF1	P38771	230 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	YJL068C	P40363	299 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	SAE2	P46946	345 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	YNL058C	P53947	316 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	HDA1	P53973	706 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	ZDS2	P54786	942 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	ARP4	P80428	489 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	YPR196W	Q06595	470 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	THI21	Q08975	551 aa		4.76	□□□□□ -1.65
TFA1	YKL028W	SMF3	Q12078	473 aa	Predicted RBP	4.76	□□□□□ -1.65
TFA1	YKL028W	RTK1	Q12100	620 aa	Predicted RBP	4.76	□□□□□ -1.65
TFA1	YKL028W	RPS17A	P02407	136 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	GCN4	P03069	281 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	RPS17B	P14127	136 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	SAM35	P14693	329 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	POL3	P15436	1097 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
TFA1	YKL028W	BET2	P20133	325 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	ROX1	P25042	368 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	MF(ALPHA)2	P32435	120 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	TEF4	P36008	412 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	ESL2	P36168	1195 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	MRPL36	P36531	177 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	PIK1	P39104	1066 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	MAM1	P40065	302 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	UBP7	P40453	1071 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	PRM2	P40534	656 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	MAD2	P40958	196 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	ENP2	P48234	707 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	BRE5	P53741	515 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	SNO2	P53823	222 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	GPD1	Q00055	391 aa	Known RBP	4.75	□□□□□ -1.65
TFA1	YKL028W	TLG1	Q03322	224 aa		4.75	□□□□□ -1.65
TFA1	YKL028W	CLU1	Q03690	1277 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms