RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W PPN1Q04119 674 aa4.02□□□□□ -1.77
VMA21YGR105W UFO1Q04511 668 aa4.02□□□□□ -1.77
VMA21YGR105W CDC26P14724 124 aa4.01□□□□□ -1.77
VMA21YGR105W TUP1P16649 713 aa4.01□□□□□ -1.77
VMA21YGR105W RPA135P22138 1203 aaKnown RBP4.01□□□□□ -1.77
VMA21YGR105W DAL3P32459 195 aa4.01□□□□□ -1.77
VMA21YGR105W BRN1P38170 754 aa4.01□□□□□ -1.77
VMA21YGR105W CDS1P38221 457 aa4.01□□□□□ -1.77
VMA21YGR105W CRG1P38892 291 aaRIP-Chip data4.01□□□□□ -1.77not detected
VMA21YGR105W PMC1P38929 1173 aaPredicted RBP4.01□□□□□ -1.77
VMA21YGR105W PAC2P39937 518 aa4.01□□□□□ -1.77
VMA21YGR105W ASN1P49089 572 aaKnown RBP4.01□□□□□ -1.77
VMA21YGR105W TIM50Q02776 476 aa4.01□□□□□ -1.77
VMA21YGR105W MDM20Q12387 796 aaKnown RBP4.01□□□□□ -1.77
VMA21YGR105W APM4Q99186 491 aa4.01□□□□□ -1.77
VMA21YGR105W FTR1P40088 404 aa4□□□□□ -1.77
VMA21YGR105W MRK1P50873 501 aa4□□□□□ -1.77
VMA21YGR105W TRS23Q03784 219 aa4□□□□□ -1.77
VMA21YGR105W YDR179W-AQ03983 463 aa4□□□□□ -1.77
VMA21YGR105W THI7Q05998 598 aa4□□□□□ -1.77
VMA21YGR105W STE4P18851 423 aa3.99□□□□□ -1.77
VMA21YGR105W SAT4P25333 603 aaKnown RBP3.99□□□□□ -1.77
VMA21YGR105W YMC1P32331 307 aa3.99□□□□□ -1.77
VMA21YGR105W YHR033WP38690 423 aa3.99□□□□□ -1.77
VMA21YGR105W PPE1P38796 400 aa3.99□□□□□ -1.77
VMA21YGR105W PRM2P40534 656 aa3.99□□□□□ -1.77
VMA21YGR105W FDC1Q03034 503 aa3.99□□□□□ -1.77
VMA21YGR105W NGL2Q03264 515 aaKnown RBP3.99□□□□□ -1.77
VMA21YGR105W NSE5Q03718 556 aa3.99□□□□□ -1.77
VMA21YGR105W COQ11Q05892 277 aa3.99□□□□□ -1.77
VMA21YGR105W YNL162W-AQ3E7A8 72 aa3.99□□□□□ -1.77
VMA21YGR105W TPK2P06245 380 aa3.98□□□□□ -1.77
VMA21YGR105W MDM10P18409 493 aa3.98□□□□□ -1.77
VMA21YGR105W MTC7P32633 139 aa3.98□□□□□ -1.77
VMA21YGR105W SER1P33330 395 aaKnown RBP3.98□□□□□ -1.77
VMA21YGR105W YGR054WP53235 642 aaKnown RBP3.98□□□□□ -1.77
VMA21YGR105W DOS2P54858 310 aa3.98□□□□□ -1.77
VMA21YGR105W FMP30Q02883 468 aa3.98□□□□□ -1.77
VMA21YGR105W ATP12P22135 325 aa3.97□□□□□ -1.77
VMA21YGR105W VPS34P22543 875 aa3.97□□□□□ -1.77
VMA21YGR105W DGR2P32330 852 aa3.97□□□□□ -1.77
VMA21YGR105W MF(ALPHA)2P32435 120 aa3.97□□□□□ -1.77
VMA21YGR105W HXT4P32467 576 aa3.97□□□□□ -1.77
VMA21YGR105W UGP1P32861 499 aaKnown RBP3.97□□□□□ -1.77
VMA21YGR105W EHT1P38295 451 aa3.97□□□□□ -1.77
VMA21YGR105W UBP12P39538 1254 aa3.97□□□□□ -1.77
VMA21YGR105W MRI1Q06489 411 aaKnown RBP3.97□□□□□ -1.77
VMA21YGR105W ADE5,7P07244 802 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W HOM2P13663 365 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W ACO1P19414 778 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VMA21YGR105W MRPL7P36519 292 aa3.96□□□□□ -1.78
VMA21YGR105W YEN1P40028 759 aa3.96□□□□□ -1.78
VMA21YGR105W YIP4P53093 235 aa3.96□□□□□ -1.78
VMA21YGR105W DAK1P54838 584 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W MFM1Q02783 413 aa3.96□□□□□ -1.78
VMA21YGR105W EFR3Q03653 782 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W HLR1Q04429 423 aa3.96□□□□□ -1.78
VMA21YGR105W NGL1Q08213 363 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W SLK19Q08581 821 aaKnown RBP3.96□□□□□ -1.78
VMA21YGR105W OSW1Q08692 278 aa3.96□□□□□ -1.78
VMA21YGR105W ULA1Q12059 462 aa3.96□□□□□ -1.78
VMA21YGR105W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VMA21YGR105W GPP2P40106 250 aaKnown RBP3.95□□□□□ -1.78
VMA21YGR105W THI6P41835 540 aa3.95□□□□□ -1.78
VMA21YGR105W YDL183CP48569 320 aa3.95□□□□□ -1.78
VMA21YGR105W RNR4P49723 345 aaKnown RBP3.95□□□□□ -1.78
VMA21YGR105W YGL117WP53133 265 aa3.95□□□□□ -1.78
VMA21YGR105W YCG1Q06680 1035 aa3.95□□□□□ -1.78
VMA21YGR105W YPR027CQ12079 277 aa3.95□□□□□ -1.78
VMA21YGR105W HMG2P12684 1045 aa3.94□□□□□ -1.78
VMA21YGR105W EUG1P32474 517 aa3.94□□□□□ -1.78
VMA21YGR105W ORC2P32833 620 aa3.94□□□□□ -1.78
VMA21YGR105W RMA1P36001 430 aaKnown RBP3.94□□□□□ -1.78
VMA21YGR105W DUG1P43616 481 aaKnown RBP3.94□□□□□ -1.78
VMA21YGR105W ENP2P48234 707 aaKnown RBP3.94□□□□□ -1.78
VMA21YGR105W ARG7Q04728 441 aa3.94□□□□□ -1.78
VMA21YGR105W AIM41Q12032 185 aa3.94□□□□□ -1.78
VMA21YGR105W RMP1Q12530 201 aa3.94□□□□□ -1.78
VMA21YGR105W ERG11P10614 530 aa3.93□□□□□ -1.78
VMA21YGR105W CNE1P27825 502 aa3.93□□□□□ -1.78
VMA21YGR105W RIM4P38741 713 aa3.93□□□□□ -1.78
VMA21YGR105W PIH1P38768 344 aa3.93□□□□□ -1.78
VMA21YGR105W YEL025CP39991 1188 aa3.93□□□□□ -1.78
VMA21YGR105W YGL081WP53156 320 aa3.93□□□□□ -1.78
VMA21YGR105W CPR8P53728 308 aa3.93□□□□□ -1.78
VMA21YGR105W CEF1Q03654 590 aaPredicted RBP3.93□□□□□ -1.78
VMA21YGR105W SKY1Q03656 742 aa3.93□□□□□ -1.78
VMA21YGR105W AAD3P25612 363 aa3.92□□□□□ -1.78
VMA21YGR105W LRO1P40345 661 aa3.92□□□□□ -1.78
VMA21YGR105W TAX4P47030 604 aa3.92□□□□□ -1.78
VMA21YGR105W BUD17P53727 317 aa3.92□□□□□ -1.78
VMA21YGR105W SQS1P53866 767 aaKnown RBP3.92□□□□□ -1.78
VMA21YGR105W ARR3Q06598 404 aa3.92□□□□□ -1.78
VMA21YGR105W YPL216WQ08964 1102 aa3.92□□□□□ -1.78
VMA21YGR105W ZPS1Q12512 249 aa3.92□□□□□ -1.78
VMA21YGR105W LEU2P04173 364 aaPredicted RBP3.91□□□□□ -1.78
VMA21YGR105W YEL076C-AP0CX16 216 aa3.91□□□□□ -1.78
VMA21YGR105W YLR464WP0CX17 216 aa3.91□□□□□ -1.78
VMA21YGR105W GRX4P32642 244 aa3.91□□□□□ -1.78
VMA21YGR105W DHR2P36009 735 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms