RNA–Protein interactions for RNA: YDR429C

TIF35, Transcript of eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene TIF35, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF35	YDR429C	THR1	P17423	357 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	PWP2	P25635	923 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	PHO11	P35842	467 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	VPS24	P36095	224 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	EHT1	P38295	451 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	PHO12	P38693	467 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	FTR1	P40088	404 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	MAD2	P40958	196 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	PXA1	P41909	870 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	PIP2	P52960	996 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	CEF1	Q03654	590 aa	Predicted RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	NSE5	Q03718	556 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	VMS1	Q04311	632 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	YFT2	Q06676	274 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	NUR1	Q12066	484 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	DIN7	Q12086	430 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	CHS5	Q12114	671 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	YKL033W-A	Q86ZR7	236 aa		3.12	□□□□□ -1.91
TIF35	YDR429C	XRN1	P22147	1528 aa	Known RBP	3.12	□□□□□ -1.91
TIF35	YDR429C	RPS9B	P05755	195 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	HMG2	P12684	1045 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	APA1	P16550	321 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	KIN82	P25341	720 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	SET3	P36124	751 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	UBS1	P38290	277 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	SRP68	P38687	599 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	FMP52	P40008	231 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	SCS2	P40075	244 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	IMA5	P40884	581 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	QRI1	P43123	477 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	MNT2	P53059	558 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	SPO1	P53541	631 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	PAP2	P53632	584 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	CNM67	P53865	581 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	MOT3	P54785	490 aa	Known RBP	3.11	□□□□□ -1.91
TIF35	YDR429C	ZRT2	Q12436	422 aa		3.11	□□□□□ -1.91
TIF35	YDR429C	SIN3	P22579	1536 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	URA3	P03962	267 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	ADH4	P10127	382 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	YEF3	P16521	1044 aa	Known RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	ARG1	P22768	420 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	DPB3	P27344	201 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	YHR097C	P38809	366 aa	Known RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	STL1	P39932	569 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	TMN3	P40071	706 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	ATF1	P40353	525 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	STU2	P46675	888 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	MPS3	P47069	682 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	TEL2	P53038	688 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	HOL1	P53389	586 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	SUB1	P54000	292 aa	Known RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	UBX4	P54730	416 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	LGE1	Q02796	332 aa	Known RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	MLC2	Q06580	163 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	YCG1	Q06680	1035 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	DIA2	Q08496	732 aa	Predicted RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	RRP6	Q12149	733 aa	Known RBP	3.1	□□□□□ -1.91
TIF35	YDR429C	ACF2	Q12168	779 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	NYV1	Q12255	253 aa		3.1	□□□□□ -1.91
TIF35	YDR429C	THO2	P53552	1597 aa	Known RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	MSS18	P08593	268 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	HOP1	P20050	605 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PRP28	P23394	588 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PHO3	P24031	467 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PTP2	P29461	750 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	YKL133C	P36066	463 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PCL5	P38794	229 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PMC1	P38929	1173 aa	Predicted RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	PIG2	P40187	538 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	HIS6	P40545	261 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	QRI7	P43122	407 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	ENP2	P48234	707 aa	Known RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	PUS4	P48567	403 aa	Known RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	PEF1	P53238	335 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	YNR071C	P53757	342 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	PPN1	Q04119	674 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	BRE1	Q07457	700 aa	Known RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	IRC10	Q08118	586 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	USV1	Q12132	391 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	YOL114C	Q12322	202 aa		3.09	□□□□□ -1.91
TIF35	YDR429C	DBP10	Q12389	995 aa	Known RBP	3.09	□□□□□ -1.91
TIF35	YDR429C	HIR3	P47171	1648 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	PRP22	P24384	1145 aa	Known RBP	3.08	□□□□□ -1.92
TIF35	YDR429C	TGL1	P34163	548 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	MTH1	P35198	433 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	YHL041W	P38730	149 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	RIM4	P38741	713 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	REV7	P38927	245 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	KHA1	P40309	873 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	MAD3	P47074	515 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	ASK10	P48361	1146 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	GND2	P53319	492 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	SNF12	P53628	566 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	HLR1	Q04429	423 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	IZH3	Q07959	543 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	PSF3	Q12146	194 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	VPS5	Q92331	675 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	MMS22	Q06164	1454 aa		3.08	□□□□□ -1.92
TIF35	YDR429C	PGI1	P12709	554 aa	Known RBP	3.07	□□□□□ -1.92
TIF35	YDR429C	CBP3	P21560	335 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms