RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	ELP3	Q02908	557 aa	Known RBP	7.6	□□□□□ -1.19
SKP1	YDR328C	PRM6	Q04705	352 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	DDC1	Q08949	612 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	LEA1	Q08963	238 aa	Predicted RBP	7.6	□□□□□ -1.19
SKP1	YDR328C	RIO1	Q12196	484 aa	Known RBP	7.6	□□□□□ -1.19
SKP1	YDR328C	HRT3	Q12347	344 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	CDC8	P00572	216 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	POL3	P15436	1097 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	PRP9	P19736	530 aa	Known RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	HSL7	P38274	827 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	AVT2	P39981	480 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	MMF1	P40185	145 aa	Known RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	CDC1	P40986	491 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	GUF1	P46943	645 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	MCM6	P53091	1017 aa	Known RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	YGR283C	P53336	341 aa	Predicted RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	YNL040W	P53960	456 aa	Predicted RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	RPL22B	P56628	122 aa	Known RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	FMP25	Q08023	583 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	THI20	Q08224	551 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	APL5	Q08951	932 aa	Known RBP	7.59	□□□□□ -1.19
SKP1	YDR328C	YDR018C	Q12185	396 aa		7.59	□□□□□ -1.19
SKP1	YDR328C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.58	□□□□□ -1.2	not detected
SKP1	YDR328C	RAD27	P26793	382 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	DSS4	P32601	143 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	UBC6	P33296	250 aa	Predicted RBP	7.58	□□□□□ -1.2
SKP1	YDR328C	LAS1	P36146	502 aa	Predicted RBP	7.58	□□□□□ -1.2
SKP1	YDR328C	YBR056W	P38081	501 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	RGD1	P38339	666 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	TIF5	P38431	405 aa	Known RBP	7.58	□□□□□ -1.2
SKP1	YDR328C	MSG5	P38590	489 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	NMD3	P38861	518 aa	Known RBP	7.58	□□□□□ -1.2
SKP1	YDR328C	FMP10	P40098	244 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	YMR134W	P40207	237 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	YNL320W	P42840	284 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	BFA1	P47113	574 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	VPS25	P47142	202 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	YML6	P51998	286 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	FAP1	P53971	965 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	CEG1	Q01159	459 aa	Predicted RBP	7.58	□□□□□ -1.2
SKP1	YDR328C	EAR1	Q03212	550 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	HEH2	Q03281	663 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	HRD3	Q05787	833 aa		7.58	□□□□□ -1.2
SKP1	YDR328C	IDI1	P15496	288 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	RGR1	P19263	1082 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	PGS1	P25578	521 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	YCR015C	P25616	317 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	MEI4	P29467	408 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	TSA1	P34760	196 aa	Known RBP	7.57	□□□□□ -1.2
SKP1	YDR328C	OLA1	P38219	394 aa	Known RBP	7.57	□□□□□ -1.2
SKP1	YDR328C	FLC2	P39719	783 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	FAF1	P40546	346 aa	Predicted RBP	7.57	□□□□□ -1.2
SKP1	YDR328C	MIC19	P43594	170 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	UTP6	Q02354	440 aa	Known RBP	7.57	□□□□□ -1.2
SKP1	YDR328C	AIM32	Q04689	311 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	THI21	Q08975	551 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	AHC1	Q12433	566 aa		7.57	□□□□□ -1.2
SKP1	YDR328C	CCP1	P00431	361 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	YML002W	P0CF17	737 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	MAS1	P10507	462 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	PEP5	P12868	1029 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	URK1	P27515	501 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	NFU1	P32860	256 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	LTV1	P34078	463 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.56	□□□□□ -1.2	not detected
SKP1	YDR328C	ECM2	P38241	364 aa	Known RBP	7.56	□□□□□ -1.2
SKP1	YDR328C	VHC1	P38329	1120 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	RIM4	P38741	713 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	YIR016W	P40572	265 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	SAP185	P40856	1058 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	HLJ1	P48353	224 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	PEX31	P53203	462 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	YNL034W	P53963	612 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	YNL018C	P53976	612 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	RKM2	Q03942	479 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	ECM22	Q05958	814 aa	Predicted RBP	7.56	□□□□□ -1.2
SKP1	YDR328C	LCB4	Q12246	624 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	IZH4	Q99393	312 aa		7.56	□□□□□ -1.2
SKP1	YDR328C	SLY1	P22213	666 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	YKR051W	P36142	418 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	YBR225W	P38321	900 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	SSP1	P38871	571 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	SAW1	P39735	261 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	MKT1	P40850	830 aa	Known RBP	7.55	□□□□□ -1.2
SKP1	YDR328C	MAF1	P41910	395 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	ALY2	P47029	1046 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	KTR6	P54070	446 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	HER2	Q03557	464 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	SPO71	Q03868	1245 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	SND1	Q04007	877 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	YDL073W	Q07454	984 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	SAM3	Q08986	587 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	FAP7	Q12055	197 aa	Predicted RBP	7.55	□□□□□ -1.2
SKP1	YDR328C	MNL2	Q12205	849 aa		7.55	□□□□□ -1.2
SKP1	YDR328C	PLC1	P32383	869 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	HXT3	P32466	567 aa	Known RBP	7.54	□□□□□ -1.2
SKP1	YDR328C	HSP78	P33416	811 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	MUD2	P36084	527 aa	Known RBP	7.54	□□□□□ -1.2
SKP1	YDR328C	CDC27	P38042	758 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	SPP381	P38282	291 aa	Predicted RBP	7.54	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 86.8 ms