RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPR1	YDR138W	CMK1	P27466	446 aa	Known RBP	4.6	□□□□□ -1.67
HPR1	YDR138W	RAD16	P31244	790 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	PET127	P32606	800 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	YLF2	P38746	405 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	AKR1	P39010	764 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	LSM5	P40089	93 aa	Known RBP	4.6	□□□□□ -1.67
HPR1	YDR138W	MND2	P40577	368 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	GSF2	Q04697	403 aa	Known RBP	4.6	□□□□□ -1.67
HPR1	YDR138W	SCM3	Q12334	223 aa		4.6	□□□□□ -1.67
HPR1	YDR138W	SPS1	P08458	490 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	RPL19A	P0CX82	189 aa	Known RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	RPL19B	P0CX83	189 aa	Predicted RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	PYC1	P11154	1178 aa	Known RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	SWI3	P32591	825 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	YHR033W	P38690	423 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	CRG1	P38892	291 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
HPR1	YDR138W	PSD1	P39006	500 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	SSP120	P39931	234 aa	Known RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	URM1	P40554	99 aa	Predicted RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	CIT3	P43635	486 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	POL31	P46957	487 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	MTR3	P48240	250 aa	Predicted RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	MRPL19	P53875	158 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	ASI2	P53895	289 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	RCM1	P53972	490 aa		4.59	□□□□□ -1.67
HPR1	YDR138W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
HPR1	YDR138W	HSH49	Q99181	213 aa	Predicted RBP	4.59	□□□□□ -1.67
HPR1	YDR138W	NAT1	P12945	854 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	VMA8	P32610	256 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	PRM2	P40534	656 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	GPD2	P41911	440 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	BFA1	P47113	574 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	IMA1	P53051	589 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	ARI1	P53111	347 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	PLB2	Q03674	706 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	SSY1	Q03770	852 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	RRG1	Q12167	365 aa	Predicted RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	LPX1	Q12405	387 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	HSP82	P02829	709 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	CHS2	P14180	963 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	DAL5	P15365	543 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	CWH43	P25618	953 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	SEC21	P32074	935 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	LRG1	P35688	1017 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	BIT61	P47041	543 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	MPP10	P47083	593 aa	Known RBP	4.58	□□□□□ -1.68
HPR1	YDR138W	GCV2	P49095	1034 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	TRI1	Q05024	226 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	IRC3	Q06683	689 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	ADY3	Q07732	790 aa		4.58	□□□□□ -1.68
HPR1	YDR138W	GCD1	P09032	578 aa	Predicted RBP	4.57	□□□□□ -1.68
HPR1	YDR138W	RSC6	P25632	483 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	ERG3	P32353	365 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	ARP2	P32381	391 aa	Known RBP	4.57	□□□□□ -1.68
HPR1	YDR138W	CTF13	P35203	478 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	EHT1	P38295	451 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	TLG1	Q03322	224 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	NSE5	Q03718	556 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	MFB1	Q04922	465 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	TAH18	Q12181	623 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	SOD2	P00447	233 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	BIK1	P11709	440 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	HMG2	P12684	1045 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	RPC53	P25441	422 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	PPE1	P38796	400 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	SLN1	P39928	1220 aa	Predicted RBP	4.57	□□□□□ -1.68
HPR1	YDR138W	GET2	P40056	285 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	LTP1	P40347	161 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	GSM1	P42950	618 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	BST1	P43571	1029 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	PRP31	P49704	494 aa	Predicted RBP	4.57	□□□□□ -1.68
HPR1	YDR138W	ORC4	P54791	529 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	YPL071C	Q02864	156 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	YLR287C	Q05881	355 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	SUL2	Q12325	893 aa		4.57	□□□□□ -1.68
HPR1	YDR138W	HRP1	Q99383	534 aa	Known RBP	4.57	□□□□□ -1.68
HPR1	YDR138W	GAL10	P04397	699 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	SUI3	P09064	285 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	YCK2	P23292	546 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	FTR1	P40088	404 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	NOP9	P47077	666 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	CCT8	P47079	568 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	SXM1	Q04175	944 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	ADY4	Q05955	493 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	CYC1	P00044	109 aa	Predicted RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	QCR6	P00127	147 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	CDC6	P09119	513 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	ILS1	P09436	1072 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	MIS1	P09440	975 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	RNR1	P21524	888 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	SGF29	P25554	259 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	NPL6	P32832	435 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	PGM1	P33401	570 aa	Known RBP	4.56	□□□□□ -1.68
HPR1	YDR138W	TFC3	P34111	1160 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	MTH1	P35198	433 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	GEX2	P36173	615 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	STB5	P38699	743 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	APE4	P38821	490 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	NCS6	P53088	359 aa		4.56	□□□□□ -1.68
HPR1	YDR138W	YNR061C	P53747	219 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms