RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CYP7A1P22680 504 aa20.99■□□□□ 0.95
PHGDH-232ENST00000641947 AIDAQ96BJ3 306 aa20.99■□□□□ 0.95
PHGDH-232ENST00000641947 NSUN4Q96CB9 384 aaKnown RBP20.99■□□□□ 0.95
PHGDH-232ENST00000641947 EPB41L4AQ9HCS5 686 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-232ENST00000641947 CDK5RAP2Q96SN8 1893 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 IL1R1P14778 569 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 GRIK5Q16478 980 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 MPNDQ8N594 471 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 TCEANC2Q96MN5 208 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 LARP6Q9BRS8 491 aaKnown RBP20.98■□□□□ 0.95
PHGDH-232ENST00000641947 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 SALL1Q9NSC2 1324 aa20.98■□□□□ 0.95
PHGDH-232ENST00000641947 ZBTB7AO95365 584 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 MECOMQ03112 1051 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 NBPF3Q9H094 633 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 PRKAB2O43741 272 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 RPS6KB1P23443 525 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 MCM2P49736 904 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 HAND2P61296 217 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 UPF1Q92900 1129 aaKnown RBP eCLIP20.97■□□□□ 0.95
PHGDH-232ENST00000641947 PDRG1Q9NUG6 133 aa20.97■□□□□ 0.95
PHGDH-232ENST00000641947 SCN9AQ15858 1988 aa20.96■□□□□ 0.95
PHGDH-232ENST00000641947 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
PHGDH-232ENST00000641947 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
PHGDH-232ENST00000641947 RIMBP2O15034 1052 aa20.96■□□□□ 0.95
PHGDH-232ENST00000641947 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
PHGDH-232ENST00000641947 DPP8Q6V1X1 898 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-232ENST00000641947 RIOK1Q9BRS2 568 aaKnown RBP20.96■□□□□ 0.95
PHGDH-232ENST00000641947 E7EWF7 191 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 LARGE1O95461 756 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 PSMA5P28066 241 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 KRT32Q14532 448 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 NAA16Q6N069 864 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-232ENST00000641947 C7orf43Q8WVR3 580 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 NEK1Q96PY6 1258 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 ZNF219Q9P2Y4 722 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-232ENST00000641947 GSG1L2A8MUP6 293 aa20.95■□□□□ 0.94
PHGDH-232ENST00000641947 DYNLL1P63167 89 aaKnown RBP20.95■□□□□ 0.94
PHGDH-232ENST00000641947 ZGPATQ8N5A5 531 aaKnown RBP20.95■□□□□ 0.94
PHGDH-232ENST00000641947 CUL4AQ13619 759 aa20.94■□□□□ 0.94
PHGDH-232ENST00000641947 WDR66Q8TBY9 1149 aa20.94■□□□□ 0.94
PHGDH-232ENST00000641947 CNKSR1Q969H4 720 aa20.94■□□□□ 0.94
PHGDH-232ENST00000641947 CTNNA3Q9UI47 895 aa20.94■□□□□ 0.94
PHGDH-232ENST00000641947 LAMB1P07942 1786 aa20.94■□□□□ 0.94
PHGDH-232ENST00000641947 MAGEB6P1A0A0J9YX57 407 aa20.93■□□□□ 0.94
PHGDH-232ENST00000641947 PATL2C9JE40 543 aaKnown RBP20.93■□□□□ 0.94
PHGDH-232ENST00000641947 HSP90AA1P07900 732 aaKnown RBP20.93■□□□□ 0.94
PHGDH-232ENST00000641947 TOB2Q14106 344 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-232ENST00000641947 R3HDM1Q15032 1099 aaKnown RBP20.93■□□□□ 0.94
PHGDH-232ENST00000641947 IL27Q8NEV9 243 aa20.93■□□□□ 0.94
PHGDH-232ENST00000641947 ZMYM6O95789 1325 aa20.93■□□□□ 0.94
PHGDH-232ENST00000641947 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
PHGDH-232ENST00000641947 APPP05067 770 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 KCNA3P22001 575 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 ALX1Q15699 326 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 IFNL3Q8IZI9 196 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 NKX2-3Q8TAU0 364 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-232ENST00000641947 IMMTQ16891 758 aaKnown RBP20.92■□□□□ 0.94
PHGDH-232ENST00000641947 TBC1D10CQ8IV04 446 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 SLC4A4Q9Y6R1 1079 aa20.92■□□□□ 0.94
PHGDH-232ENST00000641947 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
PHGDH-232ENST00000641947 ALDH8A1Q9H2A2 487 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-232ENST00000641947 LIMCH1Q9UPQ0 1083 aa20.91■□□□□ 0.94
PHGDH-232ENST00000641947 LDHBP07195 334 aaKnown RBP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 DPEP1P16444 411 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 ST3GAL1Q11201 340 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 DOK7Q18PE1 504 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 LRRC2Q9BYS8 371 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 ZC3H12CQ9C0D7 883 aaKnown RBP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 TPCN1Q9ULQ1 816 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 FAM205AQ6ZU69 1335 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 NAV1Q8NEY1 1877 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 ZNF213O14771 459 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 GNAT2P19087 354 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 EXOSC10Q01780 885 aaKnown RBP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 SPTY2D1Q68D10 685 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 DZIP1Q86YF9 867 aaKnown RBP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 COA1Q9GZY4 146 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 MTFR1LQ9H019 292 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 AATFQ9NY61 560 aaKnown RBP eCLIP20.9■□□□□ 0.94
PHGDH-232ENST00000641947 CHMP5Q9NZZ3 219 aa20.9■□□□□ 0.94
PHGDH-232ENST00000641947 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-232ENST00000641947 PSME4Q14997 1843 aa20.89■□□□□ 0.93
PHGDH-232ENST00000641947 FOCADQ5VW36 1801 aa20.89■□□□□ 0.93
PHGDH-232ENST00000641947 ME3Q16798 604 aa20.88■□□□□ 0.93
PHGDH-232ENST00000641947 Q6ZUG5 572 aa20.88■□□□□ 0.93
PHGDH-232ENST00000641947 DHX32Q7L7V1 743 aaKnown RBP20.88■□□□□ 0.93
PHGDH-232ENST00000641947 NAPBQ9H115 298 aa20.88■□□□□ 0.93
PHGDH-232ENST00000641947 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-232ENST00000641947 C21orf2O43822 256 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 GTF2IP78347 998 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 MFSD14BQ5SR56 506 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 CHST3Q7LGC8 479 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 MB21D2Q8IYB1 491 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-232ENST00000641947 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-232ENST00000641947 SMIM22K7EJ46 135 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 CERS5Q8N5B7 392 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1513.1 ms