RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ALX1Q15699 326 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
PHGDH-211ENST00000641213 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 LINC00116Q8NCU8 138 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 NKX2-3Q8TAU0 364 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 TNMDQ9H2S6 317 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 RCOR1Q9UKL0 485 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 NR1I2O75469 434 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 BCAMP50895 628 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 CHRNDQ07001 517 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 ATL3Q6DD88 541 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 CYB5R4Q7L1T6 521 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
PHGDH-211ENST00000641213 CLSTN2Q9H4D0 955 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 ZKSCAN5Q9Y2L8 839 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 SCN7AQ01118 1682 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 BCL9LQ86UU0 1499 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 ZMYM6O95789 1325 aa20■□□□□ 0.79
PHGDH-211ENST00000641213 RBM43Q6ZSC3 357 aaKnown RBP19.99■□□□□ 0.79
PHGDH-211ENST00000641213 FTOQ9C0B1 505 aaKnown RBP eCLIP19.99■□□□□ 0.79
PHGDH-211ENST00000641213 PATL2C9JE40 543 aaKnown RBP19.99■□□□□ 0.79
PHGDH-211ENST00000641213 KDM4AO75164 1064 aa19.99■□□□□ 0.79
PHGDH-211ENST00000641213 RAB11FIP4Q86YS3 637 aa19.99■□□□□ 0.79
PHGDH-211ENST00000641213 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-211ENST00000641213 TIAM2Q8IVF5 1701 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 MBD4O95243 580 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 ADCY5O95622 1261 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 USP28Q96RU2 1077 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 EPB41L4AQ9HCS5 686 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-211ENST00000641213 ANGEL1Q9UNK9 670 aaKnown RBP19.98■□□□□ 0.79
PHGDH-211ENST00000641213 TOM1O60784 492 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 TYRO3Q06418 890 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 ERFEQ4G0M1 354 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 CKAP2LQ8IYA6 745 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 IFNL3Q8IZI9 196 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
PHGDH-211ENST00000641213 BTAF1O14981 1849 aa19.97■□□□□ 0.79
PHGDH-211ENST00000641213 B4E1Z4 1266 aa19.97■□□□□ 0.79
PHGDH-211ENST00000641213 SH2B2O14492 632 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-211ENST00000641213 CPLX1O14810 134 aa19.97■□□□□ 0.79
PHGDH-211ENST00000641213 CDC5LQ99459 802 aaKnown RBP19.97■□□□□ 0.79
PHGDH-211ENST00000641213 ARMT1Q9H993 441 aa19.97■□□□□ 0.79
PHGDH-211ENST00000641213 ORC3Q9UBD5 711 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-211ENST00000641213 NEDD4P46934 1319 aa19.97■□□□□ 0.79
PHGDH-211ENST00000641213 ZNF500O60304 480 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-211ENST00000641213 PTMAP06454 111 aaKnown RBP19.96■□□□□ 0.79
PHGDH-211ENST00000641213 KCNQ4P56696 695 aa19.96■□□□□ 0.79
PHGDH-211ENST00000641213 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
PHGDH-211ENST00000641213 OTUD7BQ6GQQ9 843 aa19.96■□□□□ 0.79
PHGDH-211ENST00000641213 C3orf67Q6ZVT6 689 aa19.96■□□□□ 0.79
PHGDH-211ENST00000641213 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-211ENST00000641213 GSG1L2A8MUP6 293 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 VPS72Q15906 364 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 FBXO18Q8NFZ0 1043 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 FAM200AQ8TCP9 573 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 NAPBQ9H115 298 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 MYH13Q9UKX3 1938 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 SF3B3Q15393 1217 aaKnown RBP19.95■□□□□ 0.78
PHGDH-211ENST00000641213 TMEM87BQ96K49 555 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
PHGDH-211ENST00000641213 CNTNAP4Q9C0A0 1308 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 AP5Z1O43299 807 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 CTDSPL2Q05D32 466 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 ANKRD18AQ8IVF6 992 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 CCAR1Q8IX12 1150 aaKnown RBP19.94■□□□□ 0.78
PHGDH-211ENST00000641213 IGDCC4Q8TDY8 1250 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 SENP2Q9HC62 589 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
PHGDH-211ENST00000641213 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 PTF1AQ7RTS3 328 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 LCORLQ8N3X6 602 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 NGLY1Q96IV0 654 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 C8orf37Q96NL8 207 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 NAP1L5Q96NT1 182 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-211ENST00000641213 TACC3Q9Y6A5 838 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 PRKAB2O43741 272 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 GNAT2P19087 354 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 METAP2P50579 478 aaKnown RBP eCLIP19.93■□□□□ 0.781e-6■■□□□ 12.1
PHGDH-211ENST00000641213 GOLPH3LQ9H4A5 285 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 RTEL1Q9NZ71 1219 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 ZNF804BA4D1E1 1349 aa19.93■□□□□ 0.78
PHGDH-211ENST00000641213 ANO6Q4KMQ2 910 aa19.92■□□□□ 0.78
PHGDH-211ENST00000641213 LY9Q9HBG7 655 aa19.92■□□□□ 0.78
PHGDH-211ENST00000641213 GJB4Q9NTQ9 266 aa19.92■□□□□ 0.78
PHGDH-211ENST00000641213 BSDC1Q9NW68 430 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-211ENST00000641213 IQSEC3Q9UPP2 1182 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-211ENST00000641213 CACNA1SQ13698 1873 aa19.92■□□□□ 0.78
PHGDH-211ENST00000641213 TBC1D9BQ66K14 1250 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 BICDL1Q6ZP65 573 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 SMIM5Q71RC9 77 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 SGMS1Q86VZ5 419 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 BCL2L12Q9HB09 334 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 ZSWIM5Q9P217 1185 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.91■□□□□ 0.782e-6■■■■■ 31.1
PHGDH-211ENST00000641213 SLC4A4Q9Y6R1 1079 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 TAF1LQ8IZX4 1826 aa19.91■□□□□ 0.78
PHGDH-211ENST00000641213 RGL2O15211 777 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms