RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 LIMCH1Q9UPQ0 1083 aa21.71■■□□□ 1.07
PHGDH-209ENST00000641074 APPP05067 770 aa21.71■■□□□ 1.07
PHGDH-209ENST00000641074 IMMTQ16891 758 aaKnown RBP21.71■■□□□ 1.07
PHGDH-209ENST00000641074 NAA16Q6N069 864 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-209ENST00000641074 MPNDQ8N594 471 aa21.71■■□□□ 1.07
PHGDH-209ENST00000641074 NSUN4Q96CB9 384 aaKnown RBP21.71■■□□□ 1.07
PHGDH-209ENST00000641074 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
PHGDH-209ENST00000641074 PATL2C9JE40 543 aaKnown RBP21.7■■□□□ 1.06
PHGDH-209ENST00000641074 E7EWF7 191 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 IL1R1P14778 569 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 PRDX5P30044 214 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 HAND2P61296 217 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 MECOMQ03112 1051 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 ZGPATQ8N5A5 531 aaKnown RBP21.7■■□□□ 1.06
PHGDH-209ENST00000641074 WDR66Q8TBY9 1149 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 SALL1Q9NSC2 1324 aa21.7■■□□□ 1.06
PHGDH-209ENST00000641074 ALDH8A1Q9H2A2 487 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-209ENST00000641074 DUOX1Q9NRD9 1551 aa21.69■■□□□ 1.06
PHGDH-209ENST00000641074 ALX1Q15699 326 aa21.69■■□□□ 1.06
PHGDH-209ENST00000641074 DPP8Q6V1X1 898 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-209ENST00000641074 TMX4Q9H1E5 349 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-209ENST00000641074 CIZ1Q9ULV3 898 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-209ENST00000641074 MAGEB6P1A0A0J9YX57 407 aa21.68■■□□□ 1.06
PHGDH-209ENST00000641074 GSG1L2A8MUP6 293 aa21.68■■□□□ 1.06
PHGDH-209ENST00000641074 ZNF213O14771 459 aa21.68■■□□□ 1.06
PHGDH-209ENST00000641074 PRKAB2O43741 272 aa21.68■■□□□ 1.06
PHGDH-209ENST00000641074 GNAT2P19087 354 aa21.68■■□□□ 1.06
PHGDH-209ENST00000641074 SPTY2D1Q68D10 685 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-209ENST00000641074 EPB41L4AQ9HCS5 686 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-209ENST00000641074 C10orf71Q711Q0 1435 aa21.67■■□□□ 1.06
PHGDH-209ENST00000641074 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
PHGDH-209ENST00000641074 IFNL3Q8IZI9 196 aa21.67■■□□□ 1.06
PHGDH-209ENST00000641074 CNKSR1Q969H4 720 aa21.67■■□□□ 1.06
PHGDH-209ENST00000641074 RIOK1Q9BRS2 568 aaKnown RBP21.67■■□□□ 1.06
PHGDH-209ENST00000641074 SLC4A4Q9Y6R1 1079 aa21.67■■□□□ 1.06
PHGDH-209ENST00000641074 RIMBP2O15034 1052 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 TOB2Q14106 344 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-209ENST00000641074 INTS4Q96HW7 963 aaKnown RBP21.66■■□□□ 1.06
PHGDH-209ENST00000641074 CWC22Q9HCG8 908 aaKnown RBP21.66■■□□□ 1.06
PHGDH-209ENST00000641074 LAMA4Q16363 1823 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 ZMYM6O95789 1325 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 LARGE1O95461 756 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 DHX32Q7L7V1 743 aaKnown RBP21.66■■□□□ 1.06
PHGDH-209ENST00000641074 NBPF3Q9H094 633 aa21.66■■□□□ 1.06
PHGDH-209ENST00000641074 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
PHGDH-209ENST00000641074 LDHBP07195 334 aaKnown RBP21.65■■□□□ 1.06
PHGDH-209ENST00000641074 DYNLL1P63167 89 aaKnown RBP21.65■■□□□ 1.06
PHGDH-209ENST00000641074 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-209ENST00000641074 ZSCAN31Q96LW9 406 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-209ENST00000641074 ZC3H12CQ9C0D7 883 aaKnown RBP21.65■■□□□ 1.06
PHGDH-209ENST00000641074 TPCN1Q9ULQ1 816 aa21.65■■□□□ 1.06
PHGDH-209ENST00000641074 CCDC88AQ3V6T2 1871 aa21.64■■□□□ 1.06
PHGDH-209ENST00000641074 EXOSC10Q01780 885 aaKnown RBP21.64■■□□□ 1.06
PHGDH-209ENST00000641074 GRIK5Q16478 980 aa21.64■■□□□ 1.06
PHGDH-209ENST00000641074 DZIP1Q86YF9 867 aaKnown RBP21.64■■□□□ 1.06
PHGDH-209ENST00000641074 COA1Q9GZY4 146 aa21.64■■□□□ 1.06
PHGDH-209ENST00000641074 NAPBQ9H115 298 aa21.64■■□□□ 1.06
PHGDH-209ENST00000641074 IGSF3O75054 1194 aa21.64■■□□□ 1.05
PHGDH-209ENST00000641074 NBR1Q14596 966 aa21.64■■□□□ 1.05
PHGDH-209ENST00000641074 ME3Q16798 604 aa21.64■■□□□ 1.05
PHGDH-209ENST00000641074 Q6ZUG5 572 aa21.64■■□□□ 1.05
PHGDH-209ENST00000641074 NACAP1Q9BZK3 213 aa21.64■■□□□ 1.05
PHGDH-209ENST00000641074 NFKBIBQ15653 356 aa21.63■■□□□ 1.05
PHGDH-209ENST00000641074 C7orf43Q8WVR3 580 aa21.63■■□□□ 1.05
PHGDH-209ENST00000641074 ANP32EQ9BTT0 268 aa21.63■■□□□ 1.05
PHGDH-209ENST00000641074 SH2B1Q9NRF2 756 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-209ENST00000641074 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-209ENST00000641074 ZBTB7AO95365 584 aa21.62■■□□□ 1.05
PHGDH-209ENST00000641074 TDO2P48775 406 aa21.62■■□□□ 1.05
PHGDH-209ENST00000641074 TBC1D10CQ8IV04 446 aa21.62■■□□□ 1.05
PHGDH-209ENST00000641074 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
PHGDH-209ENST00000641074 LRRC2Q9BYS8 371 aa21.62■■□□□ 1.05
PHGDH-209ENST00000641074 AATFQ9NY61 560 aaKnown RBP eCLIP21.61■■□□□ 1.05
PHGDH-209ENST00000641074 FAM205AQ6ZU69 1335 aa21.61■■□□□ 1.05
PHGDH-209ENST00000641074 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
PHGDH-209ENST00000641074 NCOA7Q8NI08 942 aa21.61■■□□□ 1.05
PHGDH-209ENST00000641074 EYA3Q99504 573 aa21.61■■□□□ 1.05
PHGDH-209ENST00000641074 CHD4Q14839 1912 aa21.6■■□□□ 1.05
PHGDH-209ENST00000641074 DOK7Q18PE1 504 aa21.6■■□□□ 1.05
PHGDH-209ENST00000641074 MFSD14BQ5SR56 506 aa21.6■■□□□ 1.05
PHGDH-209ENST00000641074 CHST3Q7LGC8 479 aa21.6■■□□□ 1.05
PHGDH-209ENST00000641074 MB21D2Q8IYB1 491 aaPredicted RBP21.6■■□□□ 1.05
PHGDH-209ENST00000641074 KIAA1551Q9HCM1 1747 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 GTF2IP78347 998 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 GSTO1P78417 241 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 FGD1P98174 961 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 ST3GAL1Q11201 340 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 CCDC83Q8IWF9 413 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 NECAB1Q8N987 351 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 TBC1D22AQ8WUA7 517 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 BRF1Q92994 677 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 AGXT2Q9BYV1 514 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 DIXDC1Q155Q3 683 aa21.59■■□□□ 1.05
PHGDH-209ENST00000641074 RALYLQ86SE5 291 aaKnown RBP21.59■■□□□ 1.05
PHGDH-209ENST00000641074 UPF1Q92900 1129 aaKnown RBP eCLIP21.59■■□□□ 1.05
PHGDH-209ENST00000641074 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-209ENST00000641074 ATF5Q9Y2D1 282 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-209ENST00000641074 DLEC1Q9Y238 1755 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms