RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 EPS15P42566 896 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 MTHFSDQ2M296 383 aaKnown RBP5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 NBPF14Q5TI25 921 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 MSL1Q68DK7 614 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 FAM173BQ6P4H8 233 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 C11orf57Q6ZUT1 292 aaPredicted RBP5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 VSTM4Q8IW00 320 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 KCNH5Q8NCM2 988 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 PANX2Q96RD6 677 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 STMN4Q9H169 189 aaPredicted RBP5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 POLR3EQ9NVU0 708 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 SWAP70Q9UH65 585 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 SLC12A7Q9Y666 1083 aa5.69□□□□□ -1.5
HNRNPU-230ENST00000640657 ERCC3P19447 782 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 ATP2B1P20020 1258 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 POLA2Q14181 598 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 NECTIN1Q15223 517 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 RILPL1Q5EBL4 403 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 KLHL10Q6JEL2 608 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 TADA2BQ86TJ2 420 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 TEX2Q8IWB9 1127 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 RGS22Q8NE09 1264 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 HNRNPLLQ8WVV9 542 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 CABS1Q96KC9 395 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 HAUS4Q9H6D7 363 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 VIPAS39Q9H9C1 493 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 KCNH3Q9ULD8 1083 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 LUC7L2Q9Y383 392 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 PPP6R2O75170 966 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 NBPF7P0C2Y1 421 aaPredicted RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 GUCY2CP25092 1073 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 SARNPP82979 210 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 NEDD9Q14511 834 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 IFT20Q8IY31 132 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 RUBCNQ92622 972 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 CAPS2Q9BXY5 557 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 USP44Q9H0E7 712 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 CDC42BPBQ9Y5S2 1711 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 EIF3CLB5ME19 914 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 RNF113AO15541 343 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 PHACTR2O75167 634 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 ATP5JP18859 108 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 PTH1RQ03431 593 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 MTX1Q13505 466 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 MLECQ14165 292 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 IQCB1Q15051 598 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 TSGA10IPQ3SY00 556 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 MYSM1Q5VVJ2 828 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 RUFY4Q6ZNE9 571 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 TCEANC2Q96MN5 208 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 USP28Q96RU2 1077 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 EIF3CQ99613 913 aaKnown RBP5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 UBAC1Q9BSL1 405 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 PCDHA7Q9UN72 937 aa5.68□□□□□ -1.5
HNRNPU-230ENST00000640657 ZBTB43O43298 467 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 PRC1O43663 620 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CCZ1BP86790 482 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CCZ1P86791 482 aaPredicted RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 AMPD3Q01432 767 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CCDC144BQ3MJ40 725 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ISM2Q6H9L7 571 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CCDC144CPQ8IYA2 1237 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ABTB2Q8N961 1025 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 LRRC27Q9C0I9 530 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ACTR5Q9H9F9 607 aaPredicted RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 KIF1BO60333 1816 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ANKRD18BA2A2Z9 1011 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 SEC31AO94979 1220 aaKnown RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 MAP2K1Q02750 393 aaPredicted RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CACNA2D4Q7Z3S7 1137 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 MAATS1Q7Z4T9 603 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ANKRD18AQ8IVF6 992 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 MSL3Q8N5Y2 521 aaKnown RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 TSG101Q99816 390 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 SELENOOQ9BVL4 669 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 KRT23Q9C075 422 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 VEZTQ9HBM0 779 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 NFE2L3Q9Y4A8 694 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 USP42Q9H9J4 1324 aaKnown RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 RFX7Q2KHR2 1363 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 IL15P40933 162 aaPredicted RBP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 TNNC1P63316 161 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 FKBP4Q02790 459 aaKnown RBP eCLIP5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 PAK2Q13177 524 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 SLMAPQ14BN4 828 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 CCDC122Q5T0U0 273 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ALS2CLQ60I27 953 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 ARMC9Q7Z3E5 817 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 VPS36Q86VN1 386 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 IQUBQ8NA54 791 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 LRRC45Q96CN5 670 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 TMEM87BQ96K49 555 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
HNRNPU-230ENST00000640657 SAR1BQ9Y6B6 198 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms