RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 ARAP1Q96P48 1450 aa6.92□□□□□ -1.3
RTTN-220ENST00000640654 PKN1Q16512 942 aa6.91□□□□□ -1.3
RTTN-220ENST00000640654 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
RTTN-220ENST00000640654 NFXL1Q6ZNB6 911 aa6.91□□□□□ -1.3
RTTN-220ENST00000640654 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
RTTN-220ENST00000640654 SOX17Q9H6I2 414 aaPredicted RBP6.91□□□□□ -1.3
RTTN-220ENST00000640654 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
RTTN-220ENST00000640654 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
RTTN-220ENST00000640654 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
RTTN-220ENST00000640654 ZBTB39O15060 712 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 DRD2P14416 443 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 MAP7Q14244 749 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 HGSNATQ68CP4 663 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
RTTN-220ENST00000640654 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 OSMRQ99650 979 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 ZMIZ1Q9ULJ6 1067 aa6.9□□□□□ -1.3
RTTN-220ENST00000640654 FAM170BA6NMN3 283 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 TRPA1O75762 1119 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
RTTN-220ENST00000640654 ADMP35318 185 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 SOX4Q06945 474 aaPredicted RBP6.89□□□□□ -1.31
RTTN-220ENST00000640654 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 C2CD4AQ8NCU7 369 aaPredicted RBP6.89□□□□□ -1.31
RTTN-220ENST00000640654 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 CFTRP13569 1480 aa6.89□□□□□ -1.31
RTTN-220ENST00000640654 KIF27Q86VH2 1401 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 COL19A1Q14993 1142 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 PLCL1Q15111 1095 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
RTTN-220ENST00000640654 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
RTTN-220ENST00000640654 STK11IPQ8N1F8 1099 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 STK32AQ8WU08 396 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
RTTN-220ENST00000640654 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
RTTN-220ENST00000640654 PRDM2Q13029 1718 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 DBX1A6NMT0 343 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 PAPLNO95428 1278 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 EDN3P14138 238 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 RAB6AP20340 208 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 GSTM4Q03013 218 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
RTTN-220ENST00000640654 FAM69CQ0P6D2 419 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 VN1R5Q7Z5H4 357 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 ATCAYQ86WG3 371 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 EDEM1Q92611 657 aa6.87□□□□□ -1.31
RTTN-220ENST00000640654 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
RTTN-220ENST00000640654 ADH5P11766 374 aa6.86□□□□□ -1.31
RTTN-220ENST00000640654 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
RTTN-220ENST00000640654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.86□□□□□ -1.31
RTTN-220ENST00000640654 DLGAP3O95886 979 aa6.85□□□□□ -1.31
RTTN-220ENST00000640654 ESRRAP11474 423 aaPredicted RBP6.85□□□□□ -1.31
RTTN-220ENST00000640654 ZNF765Q7L2R6 523 aa6.85□□□□□ -1.31
RTTN-220ENST00000640654 KSR1Q8IVT5 923 aa6.85□□□□□ -1.31
RTTN-220ENST00000640654 ZFYVE1Q9HBF4 777 aa6.85□□□□□ -1.31
RTTN-220ENST00000640654 GTF3C3Q9Y5Q9 886 aa6.85□□□□□ -1.31
RTTN-220ENST00000640654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.84□□□□□ -1.31
RTTN-220ENST00000640654 PHACTR2O75167 634 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 NFICP08651 508 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 ZNF124Q15973 351 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 ZNF792Q3KQV3 632 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 FBLN7Q53RD9 439 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 GATA6Q92908 595 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 MISP3Q96FF7 219 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 SLC38A3Q99624 504 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
RTTN-220ENST00000640654 CHRDQ9H2X0 955 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 ACTL7BQ9Y614 415 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 ARHGAP35Q9NRY4 1499 aa6.84□□□□□ -1.31
RTTN-220ENST00000640654 DHX57Q6P158 1386 aaKnown RBP6.83□□□□□ -1.32
RTTN-220ENST00000640654 PDGFAP04085 211 aa6.83□□□□□ -1.32
RTTN-220ENST00000640654 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
RTTN-220ENST00000640654 DYMQ7RTS9 669 aa6.83□□□□□ -1.32
RTTN-220ENST00000640654 BCL7CQ8WUZ0 217 aaPredicted RBP6.83□□□□□ -1.32
RTTN-220ENST00000640654 CLP1Q92989 425 aaKnown RBP6.83□□□□□ -1.32
RTTN-220ENST00000640654 CUX2O14529 1486 aa6.83□□□□□ -1.32
RTTN-220ENST00000640654 RRBP1Q9P2E9 1410 aaKnown RBP6.83□□□□□ -1.32
RTTN-220ENST00000640654 CLSPNQ9HAW4 1339 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 CYP11A1P05108 521 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
RTTN-220ENST00000640654 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 SEMA6CQ9H3T2 930 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 RAD18Q9NS91 495 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
RTTN-220ENST00000640654 A6NHS1 94 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 EREGO14944 169 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 CYP27C1Q4G0S4 372 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 ZNF574Q6ZN55 896 aaPredicted RBP6.81□□□□□ -1.32
RTTN-220ENST00000640654 ATG4DQ86TL0 474 aaPredicted RBP6.81□□□□□ -1.32
RTTN-220ENST00000640654 HELQQ8TDG4 1101 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 FAM168AQ92567 244 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
RTTN-220ENST00000640654 RC3H2Q9HBD1 1191 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms