RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ZRSR2Q15696 482 aaKnown RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 USP17L1Q7RTZ2 530 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.62□□□□□ -1.35
RTTN-218ENST00000640408 UBN2Q6ZU65 1347 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 KLRG2A4D1S0 409 aaPredicted RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 RIMBP2O15034 1052 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 TNNT1P13805 278 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 UTP14CQ5TAP6 766 aaKnown RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 HELBQ8NG08 1087 aaPredicted RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 ZNF526Q8TF50 670 aaPredicted RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 TEKT1Q969V4 418 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 CCDC8Q9H0W5 538 aaPredicted RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 RNF41Q9H4P4 317 aaPredicted RBP6.62□□□□□ -1.35
RTTN-218ENST00000640408 NHSQ6T4R5 1651 aa6.62□□□□□ -1.35
RTTN-218ENST00000640408 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 TTC6Q86TZ1 520 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 CACNA1FO60840 1977 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 SCN11AQ9UI33 1791 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 KCPQ6ZWJ8 1503 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 CHRNA5P30532 468 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 HDLBPQ00341 1268 aaKnown RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 TFCP2Q12800 502 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 SYNE3Q6ZMZ3 975 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 RALYLQ86SE5 291 aaKnown RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 CELF1Q92879 486 aaKnown RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 ATP5JP18859 108 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 SARNPP82979 210 aaKnown RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
RTTN-218ENST00000640408 XAGE2Q96GT9 111 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 SEC31BQ9NQW1 1179 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 LIG1P18858 919 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 USP5P45974 858 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 DCAF15Q66K64 600 aa6.61□□□□□ -1.35
RTTN-218ENST00000640408 SASH1O94885 1247 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 KRT32Q14532 448 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 STRIP1Q5VSL9 837 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 C15orf52Q6ZUT6 534 aaKnown RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 LRP10Q7Z4F1 713 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 AGBL3Q8NEM8 1001 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 CIZ1Q9ULV3 898 aaPredicted RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 PA2G4Q9UQ80 394 aaKnown RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 LTBP3Q9NS15 1303 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 ERLIN1O75477 346 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 SETSIPP0DME0 302 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 ERICH2A1L162 156 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 FOXO4P98177 505 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 C20orf194Q5TEA3 1177 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 SULF1Q8IWU6 871 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 CCDC34Q96HJ3 373 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 RASSF4Q9H2L5 321 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 GTF2IP78347 998 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 TRAF1Q13077 416 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 SUPT20HL1Q3ZLR7 823 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 KRT222Q8N1A0 295 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 CRACR2BQ8N4Y2 399 aaPredicted RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 BANK1Q8NDB2 785 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 TBC1D16Q8TBP0 767 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 BOLA2Q9H3K6 86 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 RAD50Q92878 1312 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 VGLL3A8MV65 326 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 OFD1O75665 1012 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 MYCBPQ99417 103 aaPredicted RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 CD209Q9NNX6 404 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 CABP5Q9NP86 173 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 RIPOR2Q9Y4F9 1068 aa6.6□□□□□ -1.35
RTTN-218ENST00000640408 CTDP1Q9Y5B0 961 aaPredicted RBP6.6□□□□□ -1.35
RTTN-218ENST00000640408 DOT1LQ8TEK3 1739 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 GOLGA6L7A0A1B0GV03 622 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 IVLP07476 585 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 USP17L8P0C7I0 530 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 NUCB1Q02818 461 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 DCPSQ96C86 337 aaKnown RBP6.59□□□□□ -1.35
RTTN-218ENST00000640408 PCDHB15Q9Y5E8 787 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 GOLGA6L10A6NI86 522 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 CYP7A1P22680 504 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 PSMA5P28066 241 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 TIMM10P62072 90 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 CCDC102BQ68D86 513 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 MED23Q9ULK4 1368 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 PNMA6EA0A0J9YXQ4 647 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 POLR3DP05423 398 aaPredicted RBP6.59□□□□□ -1.35
RTTN-218ENST00000640408 VEGFAP15692 232 aaPredicted RBP6.59□□□□□ -1.35
RTTN-218ENST00000640408 TTC31Q49AM3 519 aaPredicted RBP6.59□□□□□ -1.35
RTTN-218ENST00000640408 DPF2Q92785 391 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 PAG1Q9NWQ8 432 aa6.59□□□□□ -1.35
RTTN-218ENST00000640408 U3KPZ7 1027 aaPredicted RBP6.59□□□□□ -1.35
RTTN-218ENST00000640408 KIF2AO00139 706 aaPredicted RBP6.59□□□□□ -1.36
RTTN-218ENST00000640408 PDE1AP54750 535 aa6.59□□□□□ -1.36
RTTN-218ENST00000640408 FKBP1AP62942 108 aaKnown RBP6.59□□□□□ -1.36
RTTN-218ENST00000640408 RABEP1Q15276 862 aa6.59□□□□□ -1.36
RTTN-218ENST00000640408 BMP2KLQ5H9B9 411 aa6.59□□□□□ -1.36
RTTN-218ENST00000640408 SPATA5Q8NB90 893 aa6.59□□□□□ -1.36
RTTN-218ENST00000640408 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms