RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
RTTN-216ENST00000640376 DHX16O60231 1041 aaKnown RBP10.48□□□□□ -0.73
RTTN-216ENST00000640376 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
RTTN-216ENST00000640376 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
RTTN-216ENST00000640376 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
RTTN-216ENST00000640376 AEBP2Q6ZN18 517 aaPredicted RBP10.48□□□□□ -0.73
RTTN-216ENST00000640376 SNAP23O00161 211 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 RXRAP19793 462 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
RTTN-216ENST00000640376 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
RTTN-216ENST00000640376 FAM160A1Q05DH4 1040 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 ERCC4Q92889 916 aaPredicted RBP10.47□□□□□ -0.73
RTTN-216ENST00000640376 ZNF512BQ96KM6 892 aaPredicted RBP10.47□□□□□ -0.73
RTTN-216ENST00000640376 TPM3P06753 285 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 ZNF75DP51815 510 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 STX1AQ16623 288 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 CYB5R4Q7L1T6 521 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 PCDHA7Q9UN72 937 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 CLIC4Q9Y696 253 aa10.47□□□□□ -0.73
RTTN-216ENST00000640376 B4E1Z4 1266 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 ERVV-1B6SEH8 477 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 CTAGE5O15320 804 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 STK38Q15208 465 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 UBE3CQ15386 1083 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 ZNF34Q8IZ26 560 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 KIAA1524Q8TCG1 905 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
RTTN-216ENST00000640376 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 AIDAQ96BJ3 306 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 SPTLC3Q9NUV7 552 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.73
RTTN-216ENST00000640376 NEDD4P46934 1319 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 COL22A1Q8NFW1 1626 aaPredicted RBP10.46□□□□□ -0.73
RTTN-216ENST00000640376 LAMB2P55268 1798 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 WDR19Q8NEZ3 1342 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 SF3A1Q15459 793 aaKnown RBP10.46□□□□□ -0.73
RTTN-216ENST00000640376 CCDC186Q7Z3E2 898 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 PLA2G4DQ86XP0 818 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 ENGASEQ8NFI3 743 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 LPIN2Q92539 896 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 NRBP1Q9UHY1 535 aa10.46□□□□□ -0.73
RTTN-216ENST00000640376 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.74
RTTN-216ENST00000640376 ZMYM6O95789 1325 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 MROH5Q6ZUA9 1318 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 A0A1B0GVL5 298 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 GOLGA6L19H0YKK7 550 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 UQCRFS1P1P0C7P4 283 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.74
RTTN-216ENST00000640376 SUSD4Q5VX71 490 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 MICU3Q86XE3 530 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 CCDC144CPQ8IYA2 1237 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 AIFM3Q96NN9 605 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 SENP2Q9HC62 589 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 CASZ1Q86V15 1759 aa10.46□□□□□ -0.74
RTTN-216ENST00000640376 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 SH2B2O14492 632 aaPredicted RBP10.45□□□□□ -0.74
RTTN-216ENST00000640376 SLC5A1P13866 664 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 LRMPQ12912 555 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 RASGRF1Q13972 1273 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 MAGEB6Q8N7X4 407 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 SPATA5Q8NB90 893 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 ACSBG1Q96GR2 724 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 FGFR2P21802 821 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 IQCB1Q15051 598 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 MPHOSPH8Q99549 860 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 INCENPQ9NQS7 918 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 MBD4O95243 580 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 NDUFA8P51970 172 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
RTTN-216ENST00000640376 FMR1NBQ8N0W7 255 aaPredicted RBP10.45□□□□□ -0.74
RTTN-216ENST00000640376 MYL10Q9BUA6 226 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
RTTN-216ENST00000640376 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
RTTN-216ENST00000640376 NRAPQ86VF7 1730 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 CAVIN2O95810 425 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 CRKLP46109 303 aaKnown RBP10.44□□□□□ -0.74
RTTN-216ENST00000640376 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 BRAPQ7Z569 592 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 PHKBQ93100 1093 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
RTTN-216ENST00000640376 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 COL4A1P02462 1669 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 BCORQ6W2J9 1755 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 RREB1Q92766 1687 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 BECN2A8MW95 431 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 DYNC1I1O14576 645 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 SPTLC2O15270 562 aa10.44□□□□□ -0.74
RTTN-216ENST00000640376 EIF5P55010 431 aaKnown RBP10.44□□□□□ -0.74
RTTN-216ENST00000640376 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms