RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.384e-8■■■□□ 18.5
SNIP1-204ENST00000638725 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-204ENST00000638725 FGAP02671 866 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 DPF2Q92785 391 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 NRDCO43847 1150 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 CMA1P23946 247 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 KCNJ6P48051 423 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 DHX16O60231 1041 aaKnown RBP12.64□□□□□ -0.39
SNIP1-204ENST00000638725 ADORA1P30542 326 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 CLCN6P51797 869 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 CABP4P57796 275 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
SNIP1-204ENST00000638725 IKBKBO14920 756 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 TICAM2Q86XR7 235 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 GLI3P10071 1580 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
SNIP1-204ENST00000638725 SCARF1Q14162 830 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
SNIP1-204ENST00000638725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNIP1-204ENST00000638725 DENND2AQ9ULE3 1009 aa12.63□□□□□ -0.39
SNIP1-204ENST00000638725 SYKP43405 635 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 UBASH3AP57075 661 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
SNIP1-204ENST00000638725 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 CEP126Q9P2H0 1117 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 TJP1Q07157 1748 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 FANCGO15287 622 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 SERPINC1P01008 464 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 PNOCQ13519 176 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
SNIP1-204ENST00000638725 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 TUBE1Q9UJT0 475 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
SNIP1-204ENST00000638725 A1BGP04217 495 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 RXRAP19793 462 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 CCDC158Q5M9N0 1113 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNIP1-204ENST00000638725 XAGE2Q96GT9 111 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 CIAO1O76071 339 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 ZAP70P43403 619 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 MYL5Q02045 173 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
SNIP1-204ENST00000638725 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 UTP14AQ9BVJ6 771 aaKnown RBP12.61□□□□□ -0.39
SNIP1-204ENST00000638725 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
SNIP1-204ENST00000638725 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 ERICH4A6NGS2 130 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 ZNF213O14771 459 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 APPBP2Q92624 585 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-204ENST00000638725 HPSEQ9Y251 543 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 LAMB4A4D0S4 1761 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 GPAA1O43292 621 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-204ENST00000638725 TUBB4AP04350 444 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
SNIP1-204ENST00000638725 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 REXO1L1PQ8IX06 675 aa12.6□□□□□ -0.39
SNIP1-204ENST00000638725 CPDO75976 1380 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-204ENST00000638725 PTPAQ15257 358 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
SNIP1-204ENST00000638725 KRT40Q6A162 431 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 VSTM4Q8IW00 320 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 UBXN4Q92575 508 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 CCP110O43303 1012 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 CBFA2T2O43439 604 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
SNIP1-204ENST00000638725 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 MNS1Q8NEH6 495 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
SNIP1-204ENST00000638725 PHKBQ93100 1093 aa12.59□□□□□ -0.39
SNIP1-204ENST00000638725 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms