RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 CDC25BP30305 580 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 NECTIN1Q15223 517 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 FEZ1Q99689 392 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
SCN1A-214ENST00000637038 BOLA2Q9H3K6 86 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 DACT1Q9NYF0 836 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 CLIP2Q9UDT6 1046 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 RTCBQ9Y3I0 505 aaKnown RBP4.64□□□□□ -1.67
SCN1A-214ENST00000637038 LTBP3Q9NS15 1303 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 CDK5RAP2Q96SN8 1893 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 NRAPQ86VF7 1730 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 AIMP1Q12904 312 aaKnown RBP4.64□□□□□ -1.67
SCN1A-214ENST00000637038 ME3Q16798 604 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 ANO6Q4KMQ2 910 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 NAA16Q6N069 864 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-214ENST00000637038 MPRIPQ6WCQ1 1025 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 FERMT3Q86UX7 667 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 NECAB1Q8N987 351 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 AKT1S1Q96B36 256 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 C1QTNF1Q9BXJ1 281 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 CCDC8Q9H0W5 538 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-214ENST00000637038 MYH2Q9UKX2 1941 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 ZNF831Q5JPB2 1677 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 MED23Q9ULK4 1368 aa4.64□□□□□ -1.67
SCN1A-214ENST00000637038 LARGE1O95461 756 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 PTH1RQ03431 593 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 SREBF2Q12772 1141 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TSGA10IPQ3SY00 556 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 GORABQ5T7V8 394 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 RGS22Q8NE09 1264 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TDRD7Q8NHU6 1098 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 KIAA1524Q8TCG1 905 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 LEO1Q8WVC0 666 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 JDP2Q8WYK2 163 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 HOOK1Q9UJC3 728 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 ZNF646O15015 1829 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 ATP5JP18859 108 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 ZNF75DP51815 510 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 KIF22Q14807 665 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CAMK4Q16566 473 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 MCMDC2Q4G0Z9 681 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TRAPPC3LQ5T215 181 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TAF3Q5VWG9 929 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 DNAJC2Q99543 621 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 SDF4Q9BRK5 362 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 MCOLN1Q9GZU1 580 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 SIL1Q9H173 461 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 MEGF6O75095 1541 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 PALLDQ8WX93 1383 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CPLX1O14810 134 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TNNT1P13805 278 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 FKBP1BP68106 108 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 STK3Q13188 491 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 SYNE3Q6ZMZ3 975 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 ANKRD24Q8TF21 1146 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 GTF3C6Q969F1 213 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 BICC1Q9H694 974 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TAF6LQ9Y6J9 622 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 H0YIN7 160 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CBFA2T2O43439 604 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 STK38Q15208 465 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 UTP14CQ5TAP6 766 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 NBPF6Q5VWK0 638 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CCDC186Q7Z3E2 898 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TTC6Q86TZ1 520 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CKAP2LQ8IYA6 745 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CCDC150Q8NCX0 1101 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 BRF1Q92994 677 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 ERO1AQ96HE7 468 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 NBPF4Q96M43 638 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 LARP6Q9BRS8 491 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 CBX8Q9HC52 389 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 HELLSQ9NRZ9 838 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 TPCN1Q9ULQ1 816 aa4.63□□□□□ -1.67
SCN1A-214ENST00000637038 PA2G4Q9UQ80 394 aaKnown RBP4.63□□□□□ -1.67
SCN1A-214ENST00000637038 SCN7AQ01118 1682 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 CDKL5O76039 1030 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 SNRPA1P09661 255 aaKnown RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 CPA1P15085 419 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 ME1P48163 572 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 PTPN14Q15678 1187 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 RC3H1Q5TC82 1133 aaKnown RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 FBXO46Q6PJ61 603 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 CDC37L1Q7L3B6 337 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 DHX32Q7L7V1 743 aaKnown RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 RALYLQ86SE5 291 aaKnown RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 FMNL2Q96PY5 1086 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 MYD88Q99836 296 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 ARID3AQ99856 593 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 METTL22Q9BUU2 404 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 LGR6Q9HBX8 967 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 TMEM51Q9NW97 253 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 ARGLU1Q9NWB6 273 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 ERBB3P21860 1342 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 ZFYP08048 801 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-214ENST00000637038 PTGS1P23219 599 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 RFC4P35249 363 aa4.62□□□□□ -1.67
SCN1A-214ENST00000637038 TRDNQ13061 729 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms