RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 PHLPP1O60346 1717 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 RABL6Q3YEC7 729 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 E4F1Q66K89 784 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 LRRN4CLQ8ND94 238 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 BSDC1Q9NW68 430 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 CTAGE5O15320 804 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 EIF3JO75822 258 aaKnown RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 SMC2O95347 1197 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 LIG1P18858 919 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 HSPA4P34932 840 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 EVCP57679 992 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 TTC14Q96N46 770 aa12.41□□□□□ -0.42
CHD2-223ENST00000636306 SCAND2PQ9GZW5 306 aaPredicted RBP12.41□□□□□ -0.42
CHD2-223ENST00000636306 ANKRD36CQ5JPF3 1778 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 A0A087WZG4 1122 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
CHD2-223ENST00000636306 KAZALD1Q96I82 304 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
CHD2-223ENST00000636306 ERCC3P19447 782 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 TUBB4BP68371 445 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 ARID5BQ14865 1188 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 DNAJC21Q5F1R6 531 aaKnown RBP12.39□□□□□ -0.43
CHD2-223ENST00000636306 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
CHD2-223ENST00000636306 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 TTC6Q86TZ1 520 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 TICAM2Q86XR7 235 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 JMYQ8N9B5 988 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
CHD2-223ENST00000636306 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 PA2G4Q9UQ80 394 aaKnown RBP12.39□□□□□ -0.43
CHD2-223ENST00000636306 SPEF2Q9C093 1822 aa12.39□□□□□ -0.43
CHD2-223ENST00000636306 GOLGA6L4A6NEF3 574 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 H3BQF6 201 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 STARD3NLO95772 234 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 APOBRQ0VD83 1088 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 STX1AQ16623 288 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 PDRG1Q9NUG6 133 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 DACT1Q9NYF0 836 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 SETQ01105 290 aaPredicted RBP12.38□□□□□ -0.43
CHD2-223ENST00000636306 CAMK4Q16566 473 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 HDXQ7Z353 690 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
CHD2-223ENST00000636306 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
CHD2-223ENST00000636306 H7C1W4 665 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 SASH1O94885 1247 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 LONRF2Q1L5Z9 754 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 FAM71BQ8TC56 605 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
CHD2-223ENST00000636306 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
CHD2-223ENST00000636306 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 ERLIN2O94905 339 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 PDCP20941 246 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 GJB2P29033 226 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 MNAT1P51948 309 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 IRX1P78414 480 aaPredicted RBP12.36□□□□□ -0.43
CHD2-223ENST00000636306 TPRNQ4KMQ1 711 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 TTLL5Q6EMB2 1281 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
CHD2-223ENST00000636306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
CHD2-223ENST00000636306 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 MICALL1Q8N3F8 863 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 ACBD3Q9H3P7 528 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
CHD2-223ENST00000636306 VPS18Q9P253 973 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
CHD2-223ENST00000636306 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
CHD2-223ENST00000636306 BECN2A8MW95 431 aa12.35□□□□□ -0.43
CHD2-223ENST00000636306 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
CHD2-223ENST00000636306 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
CHD2-223ENST00000636306 HNRNPH1P31943 449 aaKnown RBP12.35□□□□□ -0.43
CHD2-223ENST00000636306 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
CHD2-223ENST00000636306 CASP7P55210 303 aa12.35□□□□□ -0.43
CHD2-223ENST00000636306 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
CHD2-223ENST00000636306 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms