RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 UTP11Q9Y3A2 253 aaKnown RBP6.71□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC88CQ9P219 2028 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF131P52739 623 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 PPP1R12CQ9BZL4 782 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 MAD1L1Q9Y6D9 718 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 CARMIL1Q5VZK9 1371 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 S100BP04271 92 aaPredicted RBP6.71□□□□□ -1.34
SCN1A-212ENST00000636194 CAMK4Q16566 473 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 RASSF4Q9H2L5 321 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 KCNK9Q9NPC2 374 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
SCN1A-212ENST00000636194 TNNI2P48788 182 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 TTC31Q49AM3 519 aaPredicted RBP6.71□□□□□ -1.34
SCN1A-212ENST00000636194 SND1Q7KZF4 910 aaKnown RBP eCLIP6.71□□□□□ -1.34
SCN1A-212ENST00000636194 FAM212AQ96EL1 285 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 ANLNQ9NQW6 1124 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 LMCD1Q9NZU5 365 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 POGZQ7Z3K3 1410 aa6.71□□□□□ -1.34
SCN1A-212ENST00000636194 PSMA7O14818 248 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SH2D4AQ9H788 454 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TMOD3Q9NYL9 352 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 CTTNBP2NLQ9P2B4 639 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SRGAP3O43295 1099 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 HNRNPMP52272 730 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TNNC1P63316 161 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 PRKG1Q13976 671 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TMEM259Q4ZIN3 620 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TMCO5AQ8N6Q1 288 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TEKT1Q969V4 418 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 CRNKL1Q9BZJ0 848 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 MMRN2Q9H8L6 949 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SPDYE16A6NNV3 312 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 PPP1R12AO14974 1030 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 DKC1O60832 514 aaKnown RBP eCLIP6.7□□□□□ -1.346e-8■■■■■ 53.6
SCN1A-212ENST00000636194 WBP4O75554 376 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 GFAPP14136 432 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 BLVRAP53004 296 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 UAP1Q16222 522 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 NEK11Q8NG66 645 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 ARHGEF2Q92974 986 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 KCNG1Q9UIX4 513 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 KNL1Q8NG31 2342 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TSC22D1Q15714 1073 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SKA2Q8WVK7 121 aaPredicted RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 ZNF263O14978 683 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 C1orf228Q6PIY5 440 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 RNF10Q8N5U6 811 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 C6orf229H3BNL8 230 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 GSTA1P08263 222 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 GSTA2P09210 222 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 CWC27Q6UX04 472 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
SCN1A-212ENST00000636194 URB1O60287 2271 aaKnown RBP6.7□□□□□ -1.34
SCN1A-212ENST00000636194 GTPBP10A4D1E9 387 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SPDYE2BA6NHP3 402 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 KRT8P05787 483 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SPDYE6P0CI01 402 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PSMA3P25788 255 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 POLD1P28340 1107 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 GUCY1B3Q02153 619 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PPP1R21Q6ZMI0 780 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 MFSD6Q6ZSS7 791 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 CCDC25Q86WR0 208 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 GDAP1L1Q96MZ0 367 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TTC25Q96NG3 672 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 RPS6KC1Q96S38 1066 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TSPY2A6NKD2 308 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 APOEP02649 317 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TSPY3P0CV98 308 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TSPY8P0CW00 308 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PLCG2P16885 1265 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 LONP1P36776 959 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SPDYE1Q8NFV5 336 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 UBXN8O00124 270 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 LMNB1P20700 586 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SLMAPQ14BN4 828 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 MICAL1Q8TDZ2 1067 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 LZICQ8WZA0 190 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 FNBP1Q96RU3 617 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 EDEM3Q9BZQ6 932 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SCOCQ9UIL1 159 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TXNDC9O14530 226 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 IFIT3O14879 490 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 HEXIM1O94992 359 aaKnown RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 TEX9Q8N6V9 391 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 ZFP91Q96JP5 570 aaPredicted RBP6.69□□□□□ -1.34
SCN1A-212ENST00000636194 GRPEL1Q9HAV7 217 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 SLC8A2Q9UPR5 921 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 N4BP3O15049 544 aa6.69□□□□□ -1.34
SCN1A-212ENST00000636194 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms