RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 WBP11Q9Y2W2 641 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 CADPSQ9ULU8 1353 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 SBNO2Q9Y2G9 1366 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 UNC13AQ9UPW8 1703 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 NUP153P49790 1475 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 ERVK-7P63135 1459 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 MAGI2Q86UL8 1455 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 UGGT1Q9NYU2 1555 aa0.66□□□□□ -2.3
SYNGAP1-213ENST00000636193 DMDP11532 3685 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 A1L4Q6 167 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 IQCA1LA6NCM1 817 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 WIPF3A6NGB9 483 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 ASIPP42127 132 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 IL12RB1P42701 662 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 NRG1Q02297 640 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 PDE3BQ13370 1112 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 ADGRE1Q14246 886 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 CPSF6Q16630 551 aaKnown RBP eCLIP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 KIF4BQ2VIQ3 1234 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 TPRNQ4KMQ1 711 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 VARS2Q5ST30 1063 aaKnown RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 C6orf132Q5T0Z8 1188 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 GPR158Q5T848 1215 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 TMEM198Q66K66 360 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 ATG14Q6ZNE5 492 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 OTOP1Q7RTM1 612 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 C5orf24Q7Z6I8 188 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 SH3RF1Q7Z6J0 888 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 RAB44Q7Z6P3 723 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 SAPCD2Q86UD0 394 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 ZBTB38Q8NAP3 1195 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 SPATA20Q8TB22 786 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 SP7Q8TDD2 431 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 RIN2Q8WYP3 895 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 HHIPL1Q96JK4 782 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 INO80BQ9C086 356 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 CRISPLD2Q9H0B8 497 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 HMX1Q9NP08 348 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 TMPRSS4Q9NRS4 437 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 MUTYHQ9UIF7 546 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 RAXQ9Y2V3 346 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 R4GN57 208 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 PHLDB1Q86UU1 1377 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 PNPLA6Q8IY17 1366 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 AQRO60306 1485 aaKnown RBP eCLIP0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 PXDNQ92626 1479 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 KNL1Q8NG31 2342 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 COL4A1P02462 1669 aa0.65□□□□□ -2.31
SYNGAP1-213ENST00000636193 GAKO14976 1311 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 SPATA31E1Q6ZUB1 1445 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 USP32Q8NFA0 1604 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 TJP1Q07157 1748 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 TNS1Q9HBL0 1735 aaKnown RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 COL5A1P20908 1838 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ELOA3DA6NLF2 546 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ESPNB1AK53 854 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 GIPC1O14908 333 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 C8AP07357 584 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 CD1EP15812 388 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 METAP1P53582 386 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 SRSF2Q01130 221 aaKnown RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 APBA1Q02410 837 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ELOA3BQ3SY89 546 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 TMEM259Q4ZIN3 620 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 HERC4Q5GLZ8 1057 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ZNF484Q5JVG2 852 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 KIAA0895LQ68EN5 471 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 SNRNP48Q6IEG0 339 aaKnown RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 KRT25Q7Z3Z0 450 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ADGRG6Q86SQ4 1221 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 PIP4P1Q86T03 277 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 C14orf37Q86TY3 774 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 GLIS1Q8NBF1 620 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 REPS2Q8NFH8 660 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 ELOA3Q8NG57 546 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 KRTAP4-9Q9BYQ8 210 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 CCDC86Q9H6F5 360 aaKnown RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 CHPF2Q9P2E5 772 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 SUSD2Q9UGT4 822 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 IFT140Q96RY7 1462 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 SYNMO15061 1565 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 CROCC2H7BZ55 1655 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 THSD7AQ9UPZ6 1657 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 NPHP4O75161 1426 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 CD109Q6YHK3 1445 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 AKNAQ7Z591 1439 aa0.64□□□□□ -2.31
SYNGAP1-213ENST00000636193 WNK2Q9Y3S1 2297 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 MYO9BQ13459 2157 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 ADGRB1O14514 1584 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 ZNF469Q96JG9 3925 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 A0A087X0B3 334 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 J3QW42 95 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 TERTO14746 1132 aaKnown RBP0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 VGFO15240 615 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 GTPBP6O43824 516 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 LGR5O75473 907 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 KCNK5O95279 499 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 CFBP00751 764 aa0.63□□□□□ -2.31
SYNGAP1-213ENST00000636193 ITGB2P05107 769 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms