RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 COL4A5P29400 1685 aa23.83■■□□□ 1.41
CLN8-208ENST00000635751 NEK4P51957 841 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 SLFNL1Q499Z3 407 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 ARHGAP27Q6ZUM4 889 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 SBF1O95248 1867 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 GOLGA6L3A6NEY3 463 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 GOLGA6L22H0YM25 854 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 YBX3P16989 372 aaKnown RBP eCLIP23.82■■□□□ 1.4
CLN8-208ENST00000635751 CWC27Q6UX04 472 aaKnown RBP23.82■■□□□ 1.4
CLN8-208ENST00000635751 IL27Q8NEV9 243 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 FBXW7Q969H0 707 aa23.82■■□□□ 1.4
CLN8-208ENST00000635751 PSME4Q14997 1843 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 FAM205AQ6ZU69 1335 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 LTBP3Q9NS15 1303 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 FSD2A1L4K1 749 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 HIP1O00291 1037 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 NMIQ13287 307 aaPredicted RBP23.81■■□□□ 1.4
CLN8-208ENST00000635751 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 FAM227BQ96M60 508 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.81■■□□□ 1.4
CLN8-208ENST00000635751 ZNF646O15015 1829 aaPredicted RBP23.81■■□□□ 1.4
CLN8-208ENST00000635751 RFX7Q2KHR2 1363 aa23.81■■□□□ 1.4
CLN8-208ENST00000635751 RNF113AO15541 343 aaKnown RBP23.8■■□□□ 1.4
CLN8-208ENST00000635751 MAP3K12Q12852 859 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 SLC9C2Q5TAH2 1124 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 PALD1Q9ULE6 856 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 SALL1Q9NSC2 1324 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 YDJCA8MPS7 323 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 RAI14Q9P0K7 980 aa23.8■■□□□ 1.4
CLN8-208ENST00000635751 PRDX5P30044 214 aa23.79■■□□□ 1.4
CLN8-208ENST00000635751 PRELPP51888 382 aa23.79■■□□□ 1.4
CLN8-208ENST00000635751 LRRFIP1Q32MZ4 808 aaKnown RBP23.79■■□□□ 1.4
CLN8-208ENST00000635751 ZSCAN25Q6NSZ9 544 aa23.79■■□□□ 1.4
CLN8-208ENST00000635751 TICAM2Q86XR7 235 aa23.79■■□□□ 1.4
CLN8-208ENST00000635751 ZGPATQ8N5A5 531 aaKnown RBP23.79■■□□□ 1.4
CLN8-208ENST00000635751 DICER1Q9UPY3 1922 aaKnown RBP23.78■■□□□ 1.4
CLN8-208ENST00000635751 A0A0D9SFI3 127 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 SGSM2O43147 1006 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 ADD2P35612 726 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 GRIK5Q16478 980 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 MFSD14BQ5SR56 506 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 NIM1KQ8IY84 436 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 MAGEB6Q8N7X4 407 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 IL25Q9H293 177 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 MYH2Q9UKX2 1941 aa23.78■■□□□ 1.4
CLN8-208ENST00000635751 BAG4O95429 457 aaKnown RBP23.77■■□□□ 1.4
CLN8-208ENST00000635751 ZFYP08048 801 aaPredicted RBP23.77■■□□□ 1.4
CLN8-208ENST00000635751 PDE6AP16499 860 aa23.77■■□□□ 1.4
CLN8-208ENST00000635751 TBC1D22AQ8WUA7 517 aa23.77■■□□□ 1.4
CLN8-208ENST00000635751 SEC62Q99442 399 aaKnown RBP23.77■■□□□ 1.4
CLN8-208ENST00000635751 HSPA4P34932 840 aa23.77■■□□□ 1.4
CLN8-208ENST00000635751 SPTY2D1Q68D10 685 aaPredicted RBP23.77■■□□□ 1.4
CLN8-208ENST00000635751 MXD3Q9BW11 206 aa23.77■■□□□ 1.4
CLN8-208ENST00000635751 ZNF532Q9HCE3 1301 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 USP17L3A6NCW0 530 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 USP17L4A6NCW7 530 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 LDHBP07195 334 aaKnown RBP23.76■■□□□ 1.39
CLN8-208ENST00000635751 ZMYM1Q5SVZ6 1142 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 STRIP1Q5VSL9 837 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 USP17L1Q7RTZ2 530 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 RUFY2Q8WXA3 655 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 JDP2Q8WYK2 163 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 RAD50Q92878 1312 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 MAST2Q6P0Q8 1798 aa23.76■■□□□ 1.39
CLN8-208ENST00000635751 TMX3Q96JJ7 454 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 ISY1Q9ULR0 285 aaKnown RBP23.75■■□□□ 1.39
CLN8-208ENST00000635751 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 TCRBV5S4A2TA0A5A2 114 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 MECOMQ03112 1051 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 UBE3CQ15386 1083 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 GPR162Q16538 588 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 CERS5Q8N5B7 392 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 ZNF384Q8TF68 577 aa23.75■■□□□ 1.39
CLN8-208ENST00000635751 NSUN4Q96CB9 384 aaKnown RBP23.75■■□□□ 1.39
CLN8-208ENST00000635751 OSBP2Q969R2 916 aa23.74■■□□□ 1.39
CLN8-208ENST00000635751 HELLSQ9NRZ9 838 aa23.74■■□□□ 1.39
CLN8-208ENST00000635751 RAD17O75943 681 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 MCMDC2Q4G0Z9 681 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 DACT2Q5SW24 774 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 APPBP2Q92624 585 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 PUS7LQ9H0K6 701 aaKnown RBP23.73■■□□□ 1.39
CLN8-208ENST00000635751 CYP7A1P22680 504 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 CUL4AQ13619 759 aa23.73■■□□□ 1.39
CLN8-208ENST00000635751 NAA16Q6N069 864 aaPredicted RBP23.73■■□□□ 1.39
CLN8-208ENST00000635751 DZIP1Q86YF9 867 aaKnown RBP23.73■■□□□ 1.39
CLN8-208ENST00000635751 M0R2C6 588 aa23.72■■□□□ 1.39
CLN8-208ENST00000635751 CCDC129Q6ZRS4 1044 aa23.72■■□□□ 1.39
CLN8-208ENST00000635751 KIAA1211Q6ZU35 1233 aa23.72■■□□□ 1.39
CLN8-208ENST00000635751 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
CLN8-208ENST00000635751 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
CLN8-208ENST00000635751 LMNB1P20700 586 aa23.71■■□□□ 1.39
CLN8-208ENST00000635751 ADGRA1Q86SQ6 560 aa23.71■■□□□ 1.39
CLN8-208ENST00000635751 MAST3O60307 1309 aa23.71■■□□□ 1.39
CLN8-208ENST00000635751 F8W031 263 aaPredicted RBP23.7■■□□□ 1.39
CLN8-208ENST00000635751 PSMD14O00487 310 aa23.7■■□□□ 1.39
CLN8-208ENST00000635751 PKP1Q13835 747 aa23.7■■□□□ 1.39
CLN8-208ENST00000635751 INTS4Q96HW7 963 aaKnown RBP23.7■■□□□ 1.39
CLN8-208ENST00000635751 MRE11P49959 708 aa23.7■■□□□ 1.38
CLN8-208ENST00000635751 FKBP1AP62942 108 aaKnown RBP23.7■■□□□ 1.38
CLN8-208ENST00000635751 CXCL9Q07325 125 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms