RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 CYP2E1P05181 493 aaPredicted RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
ATRX-216ENST00000624403 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
ATRX-216ENST00000624403 TTF1Q15361 905 aaPredicted RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
ATRX-216ENST00000624403 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 SPATA5Q8NB90 893 aa12.4□□□□□ -0.42
ATRX-216ENST00000624403 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
ATRX-216ENST00000624403 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
ATRX-216ENST00000624403 MAST3O60307 1309 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 M0R2C6 588 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 KCNJ4P48050 445 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 NEK4P51957 841 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 CREB3L3Q68CJ9 461 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
ATRX-216ENST00000624403 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
ATRX-216ENST00000624403 ZNF804BA4D1E1 1349 aa12.38□□□□□ -0.43
ATRX-216ENST00000624403 SLC27A2O14975 620 aa12.38□□□□□ -0.43
ATRX-216ENST00000624403 GYG1P46976 350 aa12.38□□□□□ -0.43
ATRX-216ENST00000624403 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
ATRX-216ENST00000624403 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
ATRX-216ENST00000624403 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
ATRX-216ENST00000624403 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
ATRX-216ENST00000624403 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
ATRX-216ENST00000624403 SLKQ9H2G2 1235 aaPredicted RBP12.38□□□□□ -0.43
ATRX-216ENST00000624403 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
ATRX-216ENST00000624403 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
ATRX-216ENST00000624403 MMP10P09238 476 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 KLRK1P26718 216 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
ATRX-216ENST00000624403 ADD2P35612 726 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 WASHC4Q2M389 1173 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 MSL1Q68DK7 614 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 SLC51AQ86UW1 340 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 APPBP2Q92624 585 aa12.37□□□□□ -0.43
ATRX-216ENST00000624403 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
ATRX-216ENST00000624403 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
ATRX-216ENST00000624403 TBC1D12O60347 775 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 PDE6AP16499 860 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 ZKSCAN1P17029 563 aaPredicted RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 JAKMIP1Q96N16 626 aaKnown RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 DSCC1Q9BVC3 393 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
ATRX-216ENST00000624403 PARP3Q9Y6F1 533 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 NRXN2Q9P2S2 1712 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
ATRX-216ENST00000624403 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
ATRX-216ENST00000624403 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 BAG6P46379 1132 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 MCM2P49736 904 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 GPSM2P81274 684 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
ATRX-216ENST00000624403 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 XDHP47989 1333 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
ATRX-216ENST00000624403 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
ATRX-216ENST00000624403 EP400Q96L91 3159 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 SEMA3EO15041 775 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 BBOX1O75936 387 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 HSPD1P10809 573 aaKnown RBP12.34□□□□□ -0.43
ATRX-216ENST00000624403 CPA1P15085 419 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
ATRX-216ENST00000624403 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
ATRX-216ENST00000624403 DDIT3P35638 169 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 MFSD10Q14728 455 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 VPS37DQ86XT2 251 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 TTC14Q96N46 770 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
ATRX-216ENST00000624403 FOXP2O15409 715 aa12.33□□□□□ -0.44
ATRX-216ENST00000624403 GPAA1O43292 621 aa12.33□□□□□ -0.44
ATRX-216ENST00000624403 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
ATRX-216ENST00000624403 TXNRD3Q86VQ6 643 aa12.33□□□□□ -0.44
ATRX-216ENST00000624403 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
ATRX-216ENST00000624403 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms