RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
EPB42-210ENST00000622454 FAM173BQ6P4H8 233 aa16.45■□□□□ 0.22
EPB42-210ENST00000622454 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
EPB42-210ENST00000622454 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
EPB42-210ENST00000622454 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
EPB42-210ENST00000622454 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 ZPR1O75312 459 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 ALX1Q15699 326 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
EPB42-210ENST00000622454 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
EPB42-210ENST00000622454 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
EPB42-210ENST00000622454 ANTXR2P58335 489 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 TPRNQ4KMQ1 711 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
EPB42-210ENST00000622454 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
EPB42-210ENST00000622454 RESTQ13127 1097 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 SPATA32Q96LK8 384 aa16.43■□□□□ 0.22
EPB42-210ENST00000622454 GPHNQ9NQX3 736 aaPredicted RBP16.43■□□□□ 0.22
EPB42-210ENST00000622454 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
EPB42-210ENST00000622454 MBD4O95243 580 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 GNL3LQ9NVN8 582 aaKnown RBP16.42■□□□□ 0.22
EPB42-210ENST00000622454 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 LRP2BPQ9P2M1 347 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
EPB42-210ENST00000622454 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
EPB42-210ENST00000622454 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
EPB42-210ENST00000622454 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
EPB42-210ENST00000622454 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 GNAT2P19087 354 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 LEO1Q8WVC0 666 aaPredicted RBP16.41■□□□□ 0.22
EPB42-210ENST00000622454 NAPBQ9H115 298 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
EPB42-210ENST00000622454 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 GOLGA8BA8MQT2 603 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 TRIM37O94972 964 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
EPB42-210ENST00000622454 HPS5Q9UPZ3 1129 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
EPB42-210ENST00000622454 GYG1P46976 350 aa16.39■□□□□ 0.22
EPB42-210ENST00000622454 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.22
EPB42-210ENST00000622454 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.22
EPB42-210ENST00000622454 RFC4P35249 363 aa16.39■□□□□ 0.21
EPB42-210ENST00000622454 RNF214Q8ND24 703 aa16.39■□□□□ 0.21
EPB42-210ENST00000622454 NACAP1Q9BZK3 213 aa16.39■□□□□ 0.21
EPB42-210ENST00000622454 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
EPB42-210ENST00000622454 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
EPB42-210ENST00000622454 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
EPB42-210ENST00000622454 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
EPB42-210ENST00000622454 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 B4E1Z4 1266 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 CPLX1O14810 134 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
EPB42-210ENST00000622454 FOSBP53539 338 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
EPB42-210ENST00000622454 ATL3Q6DD88 541 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 PDLIM2Q96JY6 352 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 CNNM2Q9H8M5 875 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 ABCF2Q9UG63 623 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 NEDD4P46934 1319 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 SH2B2O14492 632 aaPredicted RBP16.37■□□□□ 0.21
EPB42-210ENST00000622454 PPFIA3O75145 1194 aa16.37■□□□□ 0.21
EPB42-210ENST00000622454 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
EPB42-210ENST00000622454 RRAGDQ9NQL2 400 aaPredicted RBP16.37■□□□□ 0.21
EPB42-210ENST00000622454 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
EPB42-210ENST00000622454 CYP7A1P22680 504 aa16.36■□□□□ 0.21
EPB42-210ENST00000622454 TDO2P48775 406 aa16.36■□□□□ 0.21
EPB42-210ENST00000622454 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
EPB42-210ENST00000622454 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
EPB42-210ENST00000622454 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
EPB42-210ENST00000622454 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
EPB42-210ENST00000622454 PRKAB2O43741 272 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
EPB42-210ENST00000622454 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms