RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.25
TP53-226ENST00000620739 HAND2P61296 217 aa13.46□□□□□ -0.25
TP53-226ENST00000620739 NBPF20Q3BBV1 942 aa13.46□□□□□ -0.25
TP53-226ENST00000620739 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
TP53-226ENST00000620739 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
TP53-226ENST00000620739 RNF20Q5VTR2 975 aa13.46□□□□□ -0.26
TP53-226ENST00000620739 NECAB1Q8N987 351 aa13.46□□□□□ -0.26
TP53-226ENST00000620739 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.26
TP53-226ENST00000620739 ZDHHC9Q9Y397 364 aa13.46□□□□□ -0.26
TP53-226ENST00000620739 ZNF532Q9HCE3 1301 aa13.46□□□□□ -0.26
TP53-226ENST00000620739 SERPINB2P05120 415 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 MCM4P33991 863 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 DDR1Q08345 913 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 CUL4AQ13619 759 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 GPAA1O43292 621 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 ADD2P35612 726 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 MCM2P49736 904 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
TP53-226ENST00000620739 APPBP2Q92624 585 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
TP53-226ENST00000620739 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
TP53-226ENST00000620739 FGAP02671 866 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 PDE6AP16499 860 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 ME3Q16798 604 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 BLOC1S2Q6QNY1 142 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 MAGEB6Q8N7X4 407 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
TP53-226ENST00000620739 GPR101Q96P66 508 aaPredicted RBP13.44□□□□□ -0.26
TP53-226ENST00000620739 TM6SF1Q9BZW5 370 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 LRP5O75197 1615 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 COL23A1Q86Y22 540 aaPredicted RBP13.44□□□□□ -0.26
TP53-226ENST00000620739 CEP120Q8N960 986 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
TP53-226ENST00000620739 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
TP53-226ENST00000620739 ESPNB1AK53 854 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 ST3GAL1Q11201 340 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 FOXD4L6Q3SYB3 417 aaPredicted RBP13.43□□□□□ -0.26
TP53-226ENST00000620739 FOXD4L3Q6VB84 417 aaPredicted RBP13.43□□□□□ -0.26
TP53-226ENST00000620739 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 DENND2AQ9ULE3 1009 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 TCRBV5S4A2TA0A5A2 114 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
TP53-226ENST00000620739 RPS6KB1P23443 525 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 STK3Q13188 491 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
TP53-226ENST00000620739 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■□ 24.2
TP53-226ENST00000620739 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
TP53-226ENST00000620739 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 CC2D2BQ6DHV5 1058 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 MIGA1Q8NAN2 632 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 MTMR7Q9Y216 660 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 PLSCR1O15162 318 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 PSMA5P28066 241 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
TP53-226ENST00000620739 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
TP53-226ENST00000620739 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
TP53-226ENST00000620739 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 ADGRA1Q86SQ6 560 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 E7EWF7 191 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 PRKAB2O43741 272 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 ARMT1Q9H993 441 aa13.41□□□□□ -0.26
TP53-226ENST00000620739 GPHNQ9NQX3 736 aaPredicted RBP13.41□□□□□ -0.26
TP53-226ENST00000620739 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 Q6ZUG5 572 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
TP53-226ENST00000620739 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
TP53-226ENST00000620739 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 UBE3CQ15386 1083 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
TP53-226ENST00000620739 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
TP53-226ENST00000620739 ZNF804BA4D1E1 1349 aa13.4□□□□□ -0.26
TP53-226ENST00000620739 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
TP53-226ENST00000620739 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 MBD4O95243 580 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
TP53-226ENST00000620739 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 BRF1Q92994 677 aa13.39□□□□□ -0.27
TP53-226ENST00000620739 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms